diff --git a/joss/paper.bib b/joss/paper.bib new file mode 100644 index 000000000..de7df10bc --- /dev/null +++ b/joss/paper.bib @@ -0,0 +1,380 @@ +@article{vocialta_3d_2016, + title = {{3D} dynamic fragmentation with parallel dynamic insertion of cohesive elements}, + issn = {1097-0207}, + url = {http://onlinelibrary.wiley.com/doi/10.1002/nme.5339/abstract}, + doi = {10.1002/nme.5339}, + language = {en}, + urldate = {2016-08-02}, + journal = {International Journal for Numerical Methods in Engineering}, + author = {Vocialta, M. and Richart, N. and Molinari, J.f.}, + month = jan, + year = {2016}, + keywords = {Cohesive elements, Dynamic fragmentation, high performance computing, numerical instability}, + pages = {n/a--n/a}, +} + +@article{taheri_mousavi_dynamic_2015, + title = {Dynamic crack propagation in a heterogeneous ceramic microstructure, insights from a cohesive model}, + volume = {88}, + issn = {13596454}, + url = {http://linkinghub.elsevier.com/retrieve/pii/S1359645415000075}, + doi = {10.1016/j.actamat.2015.01.003}, + language = {en}, + urldate = {2015-09-14}, + journal = {Acta Materialia}, + author = {Taheri Mousavi, S.M. and Richart, N. and Wolff, C. and Molinari, J.F.}, + month = apr, + year = {2015}, + pages = {136--146}, +} + +@article{richart_implementation_2015, + title = {Implementation of a parallel finite-element library: {Test} case on a non-local continuum damage model}, + volume = {100}, + issn = {0168-874X}, + shorttitle = {Implementation of a parallel finite-element library}, + url = {http://www.sciencedirect.com/science/article/pii/S0168874X15000153}, + doi = {10.1016/j.finel.2015.02.003}, + urldate = {2015-04-29}, + journal = {Finite Elements in Analysis and Design}, + author = {Richart, N. and Molinari, J. F.}, + month = aug, + year = {2015}, + keywords = {Continuum damage, Finite element method, non-local approach, Parallel computing}, + pages = {41--46}, +} + +@article{wolff_non-local_2014, + title = {A non-local continuum damage approach to model dynamic crack branching}, + copyright = {Copyright © 2014 John Wiley \& Sons, Ltd.}, + issn = {1097-0207}, + url = {http://onlinelibrary.wiley.com/doi/10.1002/nme.4837/abstract}, + doi = {10.1002/nme.4837}, + language = {en}, + urldate = {2015-02-02}, + journal = {International Journal for Numerical Methods in Engineering}, + author = {Wolff, Cyprien and Richart, Nicolas and Molinari, Jean-François}, + year = {2014}, + keywords = {brittle failure, continuum damage model, dynamic crack branching, finite-element method, non-local approach, PMMA}, + pages = {n/a--n/a}, +} + +@article{brun_hybrid_2021, + title = {Hybrid asynchronous {SEM}/{FEM} co-simulation for seismic nonlinear analysis of concrete gravity dams}, + volume = {245}, + issn = {0045-7949}, + url = {https://www.sciencedirect.com/science/article/pii/S0045794920302625}, + doi = {10.1016/j.compstruc.2020.106459}, + language = {en}, + urldate = {2021-09-21}, + journal = {Computers \& Structures}, + author = {Brun, Michael and De Martin, Florent and Richart, Nicolas}, + month = mar, + year = {2021}, + keywords = {Domain decomposition, Elastic wave, Hybrid asynchronous time integrator, Nonlinear transient analysis, SEM/FEM co-simulation, Soil structure interaction}, + pages = {106459}, +} + +@article{zhang_numerical_2018, + title = {Numerical evaluation of test setups for determining the shear strength of masonry}, + volume = {51}, + issn = {1871-6873}, + url = {https://doi.org/10.1617/s11527-018-1236-6}, + doi = {10.1617/s11527-018-1236-6}, + language = {en}, + number = {4}, + urldate = {2021-09-21}, + journal = {Materials and Structures}, + author = {Zhang, Shenghan and Richart, Nicolas and Beyer, Katrin}, + month = aug, + year = {2018}, + pages = {110}, +} + +@article{zhang_micro-mechanical_2017, + title = {Micro-mechanical finite element modeling of diagonal compression test for historical stone masonry structure}, + volume = {112}, + issn = {0020-7683}, + url = {https://www.sciencedirect.com/science/article/pii/S0020768317300690}, + doi = {10.1016/j.ijsolstr.2017.02.014}, + language = {en}, + urldate = {2021-09-21}, + journal = {International Journal of Solids and Structures}, + author = {Zhang, Shenghan and Taheri Mousavi, Seyedeh Mohadeseh and Richart, Nicolas and Molinari, Jean-François and Beyer, Katrin}, + month = may, + year = {2017}, + keywords = {Cohesive zone modeling, Diagonal compression test, Failure mechanism, Meso-scale simulation, Stone masonry}, + pages = {122--132}, +} + +@article{gallyamov_multi-scale_2020, + title = {Multi-scale modelling of concrete structures affected by alkali-silica reaction: {Coupling} the mesoscopic damage evolution and the macroscopic concrete deterioration}, + volume = {207}, + issn = {0020-7683}, + shorttitle = {Multi-scale modelling of concrete structures affected by alkali-silica reaction}, + url = {https://www.sciencedirect.com/science/article/pii/S0020768320303942}, + doi = {10.1016/j.ijsolstr.2020.10.010}, + language = {en}, + urldate = {2021-09-21}, + journal = {International Journal of Solids and Structures}, + author = {Gallyamov, E. R. and Cuba Ramos, A. I. and Corrado, M. and Rezakhani, R. and Molinari, J. -F.}, + month = dec, + year = {2020}, + keywords = {Alkali-silica reaction, Damage model, FE, High performance computing}, + pages = {262--278}, +} + +@article{zhang_numerical_2019, + title = {Numerical investigation of the role of masonry typology on shear strength}, + volume = {192}, + issn = {0141-0296}, + url = {https://www.sciencedirect.com/science/article/pii/S0141029618321515}, + doi = {10.1016/j.engstruct.2019.04.026}, + language = {en}, + urldate = {2021-09-21}, + journal = {Engineering Structures}, + author = {Zhang, Shenghan and Beyer, Katrin}, + month = aug, + year = {2019}, + keywords = {Block area ratio, Detailed micro-modeling, Force capacity, Historical masonry, Line of minimum trace, Stone pattern}, + pages = {86--102}, +} + +@article{yilmaz_mesoscale_2017, + title = {A mesoscale fracture model for concrete}, + volume = {97}, + issn = {0008-8846}, + url = {https://www.sciencedirect.com/science/article/pii/S0008884616305828}, + doi = {10.1016/j.cemconres.2017.03.014}, + language = {en}, + urldate = {2021-09-21}, + journal = {Cement and Concrete Research}, + author = {Yılmaz, Okan and Molinari, Jean-François}, + month = jul, + year = {2017}, + keywords = {Cohesive zone, Dynamic failure, Finite-element method, Mesostructure}, + pages = {84--94}, +} + +@article{vocialta_numerical_2018, + title = {Numerical analysis of fragmentation in tempered glass with parallel dynamic insertion of cohesive elements}, + volume = {188}, + issn = {0013-7944}, + url = {https://www.sciencedirect.com/science/article/pii/S001379441630577X}, + doi = {10.1016/j.engfracmech.2017.09.015}, + language = {en}, + urldate = {2021-09-21}, + journal = {Engineering Fracture Mechanics}, + author = {Vocialta, M. and Corrado, M. and Molinari, J. -F.}, + month = feb, + year = {2018}, + keywords = {Cohesive elements, Dynamic fragmentation, Finite-element method, High performance computing, Thermally tempered glass}, + pages = {448--469}, +} + +@article{corrado_effects_2016, + title = {Effects of residual stresses on the tensile fatigue behavior of concrete}, + volume = {89}, + issn = {0008-8846}, + url = {https://www.sciencedirect.com/science/article/pii/S0008884616301946}, + doi = {10.1016/j.cemconres.2016.08.014}, + language = {en}, + urldate = {2021-09-21}, + journal = {Cement and Concrete Research}, + author = {Corrado, M. and Molinari, J. -F.}, + month = nov, + year = {2016}, + keywords = {Cohesive elements, Concrete, Fatigue behavior, Mesoscale FEM, Residual stresses}, + pages = {206--219}, +} + +@article{albertini_three-dimensional_nodate, + title = {A three-dimensional hybrid finite element — spectral boundary integral method for modeling earthquakes in complex unbounded domains}, + volume = {n/a}, + issn = {1097-0207}, + url = {https://onlinelibrary.wiley.com/doi/abs/10.1002/nme.6816}, + doi = {10.1002/nme.6816}, + language = {en}, + number = {n/a}, + urldate = {2021-09-21}, + journal = {International Journal for Numerical Methods in Engineering}, + author = {Albertini, Gabriele and Elbanna, Ahmed E. and Kammer, David S.}, + note = {\_eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1002/nme.6816}, + keywords = {dynamic fracture, earthquake modeling, finite element method, hybrid method, spectral boundary integral method}, +} + +@article{cuba_ramos_hpc_2018, + title = {{HPC} simulations of alkali-silica reaction-induced damage: {Influence} of alkali-silica gel properties}, + volume = {109}, + issn = {0008-8846}, + shorttitle = {{HPC} simulations of alkali-silica reaction-induced damage}, + url = {https://www.sciencedirect.com/science/article/pii/S000888461731150X}, + doi = {10.1016/j.cemconres.2018.03.020}, + language = {en}, + urldate = {2021-09-21}, + journal = {Cement and Concrete Research}, + author = {Cuba Ramos, Aurelia I. and Roux-Langlois, Clément and Dunant, Cyrille F. and Corrado, Mauro and Molinari, Jean-François}, + month = jul, + year = {2018}, + keywords = {Alkali-silica-reaction, GFEM/XFEM, High-performance computing, Sequentially linear analysis}, + pages = {90--102}, +} + +@article{rezakhani_meso-scale_2021, + title = {Meso-scale finite element modeling of {Alkali}-{Silica}-{Reaction}}, + volume = {278}, + issn = {0950-0618}, + doi = {10.1016/j.conbuildmat.2021.122244}, + language = {English}, + journal = {Construction and Building Materials}, + author = {Rezakhani, R. and Gallyamov, E. and Molinari, J.F.}, + year = {2021}, + keywords = {Alkali-Silica-Reaction, Damage, Finite-element method, Meso-scale}, +} + +@article{yilmaz_damage_2017, + title = {Damage cluster distributions in numerical concrete at the mesoscale}, + issn = {1095-3787}, + doi = {10.1103/PhysRevE.95.043002}, + journal = {Physical Review E}, + editor = {Yilmaz, Okan and Derlet, Peter Michael and Molinari, Jean-François}, + year = {2017}, + note = {Num Pages: 12 +Place: College Pk +Publisher: Amer Physical Soc}, +} + +@article{radiguet_role_2015, + series = {Materials and {Interfaces}}, + title = {The role of viscoelasticity on heterogeneous stress fields at frictional interfaces}, + volume = {80}, + issn = {0167-6636}, + url = {https://www.sciencedirect.com/science/article/pii/S0167663614000520}, + doi = {10.1016/j.mechmat.2014.03.009}, + language = {en}, + urldate = {2021-09-21}, + journal = {Mechanics of Materials}, + author = {Radiguet, M. and Kammer, D. S. and Molinari, J. F.}, + month = jan, + year = {2015}, + keywords = {Dynamic simulations, Frictional interface, Heterogeneous stresses, History effect, Viscoelasticity}, + pages = {276--287}, +} + +@article{svetlizky_properties_2016, + title = {Properties of the shear stress peak radiated ahead of rapidly accelerating rupture fronts that mediate frictional slip}, + volume = {113}, + copyright = {© . http://www.pnas.org/preview\_site/misc/userlicense.xhtml}, + issn = {0027-8424, 1091-6490}, + url = {https://www.pnas.org/content/113/3/542}, + doi = {10.1073/pnas.1517545113}, + language = {en}, + number = {3}, + urldate = {2021-09-21}, + journal = {Proceedings of the National Academy of Sciences}, + author = {Svetlizky, Ilya and Muñoz, Daniel Pino and Radiguet, Mathilde and Kammer, David S. and Molinari, Jean-François and Fineberg, Jay}, + month = jan, + year = {2016}, + pmid = {26729877}, + note = {Publisher: National Academy of Sciences +Section: Physical Sciences}, + keywords = {acoustic radiation, earthquake dynamics, friction, nonsteady rupture dynamics, seismic radiation}, + pages = {542--547}, +} + +@article{kammer_propagation_2012, + title = {On the {Propagation} of {Slip} {Fronts} at {Frictional} {Interfaces}}, + volume = {48}, + issn = {1573-2711}, + url = {https://doi.org/10.1007/s11249-012-9920-0}, + doi = {10.1007/s11249-012-9920-0}, + language = {en}, + number = {1}, + urldate = {2021-09-21}, + journal = {Tribology Letters}, + author = {Kammer, David S. and Yastrebov, Vladislav A. and Spijker, Peter and Molinari, Jean-François}, + month = oct, + year = {2012}, + pages = {27--32}, +} + +@article{cuba_ramos_new_2015, + title = {A new formulation for imposing {Dirichlet} boundary conditions on non-matching meshes}, + volume = {103}, + issn = {1097-0207}, + url = {https://onlinelibrary.wiley.com/doi/abs/10.1002/nme.4898}, + doi = {10.1002/nme.4898}, + language = {en}, + number = {6}, + urldate = {2021-09-21}, + journal = {International Journal for Numerical Methods in Engineering}, + author = {Cuba Ramos, Aurelia and Aragón, Alejandro M. and Soghrati, Soheil and Geubelle, Philippe H. and Molinari, Jean-François}, + year = {2015}, + note = {\_eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1002/nme.4898}, + keywords = {Dirichlet boundary conditions, GFEM, IGFEM, Lagrange multiplier method, non-matching meshes, XFEM}, + pages = {430--444}, +} + +@article{kammer_length_2016, + title = {Length scale of interface heterogeneities selects propagation mechanism of frictional slip fronts}, + volume = {88}, + issn = {0022-5096}, + url = {https://www.sciencedirect.com/science/article/pii/S0022509615301095}, + doi = {10.1016/j.jmps.2015.12.014}, + language = {en}, + urldate = {2021-09-21}, + journal = {Journal of the Mechanics and Physics of Solids}, + author = {Kammer, D. S. and Pino Muñoz, D. and Molinari, J. F.}, + month = mar, + year = {2016}, + keywords = {Dynamic fracture, Finite elements, Fracture mechanisms, Friction, Heterogeneous interface}, + pages = {23--34}, +} + +@article{vocialta_influence_2015, + title = {Influence of internal impacts between fragments in dynamic brittle tensile fragmentation}, + volume = {58}, + issn = {0020-7683}, + url = {https://www.sciencedirect.com/science/article/pii/S0020768315000104}, + doi = {10.1016/j.ijsolstr.2015.01.008}, + language = {en}, + urldate = {2021-09-21}, + journal = {International Journal of Solids and Structures}, + author = {Vocialta, M. and Molinari, J. -F.}, + month = apr, + year = {2015}, + keywords = {Cohesive elements, Contact, Fragmentation, Residual velocities}, + pages = {247--256}, +} + +@article{yilmaz_influence_2018, + title = {Influence of heterogeneities on crack propagation}, + volume = {209}, + issn = {1573-2673}, + url = {https://doi.org/10.1007/s10704-017-0239-6}, + doi = {10.1007/s10704-017-0239-6}, + language = {en}, + number = {1}, + urldate = {2021-09-21}, + journal = {International Journal of Fracture}, + author = {Yılmaz, Okan and Bleyer, Jérémy and Molinari, Jean-François}, + month = jan, + year = {2018}, + pages = {77--90}, +} + +@article{kammer_existence_2014, + title = {The existence of a critical length scale in regularised friction}, + volume = {63}, + issn = {0022-5096}, + url = {https://www.sciencedirect.com/science/article/pii/S0022509613002159}, + doi = {10.1016/j.jmps.2013.10.007}, + language = {en}, + urldate = {2021-09-21}, + journal = {Journal of the Mechanics and Physics of Solids}, + author = {Kammer, D. S. and Yastrebov, V. A. and Anciaux, G. and Molinari, J. F.}, + month = feb, + year = {2014}, + keywords = {Explicit dynamics, Finite-element, Interface rupture, Numerical modelling, Regularised friction}, + pages = {40--50}, +} diff --git a/joss/paper.md b/joss/paper.md new file mode 100644 index 000000000..8dfb64e55 --- /dev/null +++ b/joss/paper.md @@ -0,0 +1,89 @@ +--- +title: 'Akantu: a finite-element library for contact an fracture simulations' +tags: + - C++ + - python + - contact + - fracture + - cohesive element + +authors: + - name: Nicolas Richart + orcid: 0000-0002-1463-4405 + affiliation: 1 + - name: Guillaume Anciaux + orcid: 0000-0002-9624-5621 + affiliation: 1 + - name: Emil Gallyamov + affiliation: 1 + - name: Lucas Frérot + orcid: 0000-0002-4138-1052 + affiliation: "1, 2" + - name: David Kammer + orcid: 0000-0003-3782-9368 + affiliation: "1, 3" + - name: Mohit Pundir + affiliation: "1, 3" + - name: Marco Vocialta + affiliation: 1 + - name: Aurelia Cuba Ramos + affiliation: 1 + - name: Mauro Corrado + affiliation: "1, 4" + - name: Fabian Barras + orcid: 0000-0003-1109-0200 + affiliation: "1, 5" + - name: Jean-François Molinari + orcid: 0000-0002-1728-1844 + affiliation: 1 + +affiliations: + - name: Civil Engineering Institute, École Polytechnique Fédérale de Lausanne, Switzerland + index: 1 + - name: Department of Physics and Astronomy, Johns Hopkins University, Baltimore, Maryland, United States. + index: 2 + - name: Institute for Building Materials, ETH Zurich, Switzerland + index: 3 + - name: Department of Structural, Geotechnical and Building Engineering, Politecnico di Torino, Italy + index: 4 + - name: The Njord Centre Department of Physics, Department of Geosciences, University of Oslo, Norway + index: 5 + +date: 21 Septembre 2021 +bibliography: paper.bibtex +--- + +# Summary + +# Statement of need + +# Publications +The following publications have been made possible with ``Akantu``: + +- @kammer_propagation_2012 +- @kammer_existence_2014 +- @wolff_non-local_2014 +- @richart_implementation_2015 +- @taheri_mousavi_dynamic_2015 +- @cuba_ramos_new_2015 +- @radiguet_role_2015 +- @vocialta_influence_2015 +- @corrado_effects_2016 +- @kammer_length_2016 +- @svetlizky_properties_2016 +- @vocialta_3d_2016 +- @yilmaz_mesoscale_2017 +- @yilmaz_damage_2017 +- @zhang_micro-mechanical_2017 +- @cuba_ramos_hpc_2018 +- @vocialta_numerical_2018 +- @yilmaz_influence_2018 +- @zhang_numerical_2018 +- @zhang_numerical_2019 +- @gallyamov_multi-scale_2020 +- @albertini_three-dimensional_2021 +- @brun_hybrid_2021 +- @rezakhani_meso-scale_2021 + +# Acknowledgement +