Diffusion akantu 8ec6afee0ae1

akantu-private
8ec6afee0ae1
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Authored by frerot on Aug 14 2019, 10:27.

Description

Merge branch 'master' of ssh://c4science.ch/diffusion/AKAPRIV/akantu-private

Details

Committed

frerot

Aug 14 2019, 10:27

Pushed

richart	Dec 6 2019, 13:35
richart	Dec 6 2019, 13:16
richart	Dec 6 2019, 12:16
richart	Dec 6 2019, 11:45
richart	Dec 5 2019, 22:54
richart	Dec 5 2019, 18:45

Parents

rAKAc133939b4175: protected pybind tests if python interface is not activated
rAKA7c4625ecd4a8: made the getNbDataPerElem more generic

Branches

Unknown

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Event Timeline

frerot committed rAKA8ec6afee0ae1: Merge branch 'master' of ssh://c4science.ch/diffusion/AKAPRIV/akantu-private (authored by frerot).Aug 14 2019, 10:27

Merged Changes

Commit	Author	Details	Committed
7c4625ecd4a8	richart	made the getNbDataPerElem more generic	Aug 9 2019
31edf7c58312	richart	Make tests faster by not running the examples	Jul 23 2019
2e0de6f355e9	richart	Adding more options to ci	Jul 19 2019
66e096390ab1	richart	backward compatibility for pybind11 interface	Jul 19 2019
b2a2f97d97ac	richart	Correcting some examples	Jul 19 2019
cca380adb866	richart	run parallel examples with mpi	Jul 19 2019
fe2c711063a8	richart	arc lint --everything	Jul 19 2019
cb52825d7599	richart	Making examples testable (just running them nothing fancy)	Jul 19 2019
1e85232f7ebf	richart	adapt to latest changes	Jul 19 2019
10c49fba4670	richart	removed unused variables	Jul 19 2019
9b6b46814f0d	richart	Trying to figure out the checkout	Jul 19 2019
d6e9f68dd00a	richart	more synthax errors	Jul 18 2019
5e4f8ff24796	richart	Merge branch 'master' of c4science.ch:/diffusion/AKAPRIV/akantu-private	Jul 18 2019
ebea3132a246	richart	bug in synthax	Jul 18 2019
c2fe86fb4370	richart	Checkout proper commit	Jul 18 2019
ae029b2fda07	richart	skip default checkout	Jul 18 2019
2813b05096af	gallyamov	Merge branch 'master' of ssh://c4science.ch/diffusion/AKAPRIV/akantu-private	Jul 18 2019
be1354eb1f45	gallyamov	Remove ghost_type from energy computation	Jul 18 2019
04e324e17215	richart	Removing artifacts	Jul 18 2019
c4154a2402d9	richart	Removed checkout	Jul 18 2019
9cea2d034ba7	richart	adding pytest to docker image	Jul 18 2019
83322d1823cd	richart	zip build in case of failure	Jul 18 2019
64db8e210c9f	richart	Bug fix artifacts	Jul 18 2019
cdc8b43fdb16	richart	Exscan never significant on process 0	Jul 17 2019
51030581c793	richart	artifacting to jenkins too	Jul 17 2019
0705055d933a	richart	Linting only the last one	Jul 17 2019
153f95c08058	richart	make it steps	Jul 17 2019
482419209d5a	richart	Forcing commit id	Jul 17 2019
e85c48c56d22	richart	Merge branch 'master' of c4science.ch:/diffusion/AKAPRIV/akantu-private	Jul 17 2019
95d94c4f9907	richart	Update jenkinsfile	Jul 17 2019
308ced2de8ff	richart	Bug fix on exscan for proc 0	Jul 17 2019
88c75927c0ff	gallyamov	Correction in the internal field	Jul 17 2019
b7fa2cd65510	gallyamov	Bug fix in Jacobian assembly part II	Jul 17 2019
45f7051bd470	gallyamov	Small fix in material anisotropic	Jul 17 2019
a67940e8245b	gallyamov	Bug fix in extra materials on compilation	Jul 17 2019
de3b2b42cb1f	pundir/gallyamov	Bug fix in updating Jacobian with cohesive elements	Jul 17 2019
c3496bf61b8d	richart/gallyamov	Bug fix with aka_array_tmpl due to compiler version	Jul 17 2019
d4c15ff0af18	richart	bug fix in the model interface pybind11	Jul 16 2019
64b062ea67f5	richart	Allowing to call the solver with a different solver callback	Jul 4 2019
1ac558c31da4	richart	Merge branch 'master' of c4science.ch:/diffusion/AKAPRIV/akantu-private	Jul 3 2019
34b888c7b651	richart	Adding first version of anisotroptic damage law	Jul 3 2019
8a9c0bc03921	richart	Fixed compilations of examples	Jul 3 2019

Changes (435)

				Path
	A			.flake8
	M			CMakeLists.txt
	M			Jenkinsfile
	M			cmake/AkantuExampleMacros.cmake
	M			cmake/AkantuMacros.cmake
	M			cmake/AkantuSimulationMacros.cmake
	M			cmake/AkantuTestsMacros.cmake
	M			cmake/libakantu/v3/printers.py
	M			examples/cohesive_element/cohesive_extrinsic/cohesive_extrinsic.cc
	M			examples/cohesive_element/cohesive_extrinsic_implicit/cohesive_extrinsic_implicit.cc
	M			examples/cohesive_element/cohesive_intrinsic/cohesive_intrinsic.cc
	M			examples/cohesive_element/cohesive_intrinsic/triangle.geo
	M			examples/explicit/explicit_dynamic.cc
	M			examples/heat_transfer/heat_transfer_static_2d.cc
	M			examples/implicit/implicit_dynamic.cc
	M			examples/io/dumper/CMakeLists.txt
	M			examples/io/dumper/dumpable_interface.cc
	M			examples/io/dumper/dumper_low_level.cc
	M			examples/new_material/local_material_damage.cc
	M			examples/new_material/local_material_damage.hh
	M			examples/new_material/local_material_damage_inline_impl.hh
	M			examples/new_material/viscoelastic_maxwell/material_viscoelastic_maxwell_energies.cc
	M			examples/parallel/CMakeLists.txt
	A			examples/python/cohesive/CMakeLists.txt
	M			examples/python/cohesive/plate.py
	M			examples/python/custom-material/CMakeLists.txt
	M			examples/python/custom-material/bi-material.py
	M			examples/python/custom-material/custom-material.py
	A			examples/python/dynamics/CMakeLists.txt
	M			examples/python/dynamics/dynamics.py
	A			examples/python/eigen_modes/CMakeLists.txt
	M			examples/python/eigen_modes/eigen_modes.py
	M			examples/python/eigen_modes/image_saver.py
	M			examples/python/plate-hole/CMakeLists.txt
	D			examples/python/plate-hole/plate-mpi.py
	M			examples/python/plate-hole/plate.py
	M			examples/python/stiffness_matrix/CMakeLists.txt
	M			examples/python/stiffness_matrix/stiffness_matrix.py
	M			extra_packages/extra-materials/src/material_FE2/material_FE2.cc
	M			extra_packages/extra-materials/src/material_FE2/solid_mechanics_model_RVE.cc
	M			extra_packages/extra-materials/src/material_damage/material_brittle_inline_impl.cc
	M			extra_packages/extra-materials/src/material_damage/material_damage_iterative.cc
	M			extra_packages/extra-materials/src/material_damage/material_damage_iterative.hh
	M			extra_packages/extra-materials/src/material_damage/material_damage_iterative_inline_impl.cc
	M			extra_packages/extra-materials/src/material_damage/material_orthotropic_damage.hh
	M			extra_packages/extra-materials/src/material_damage/material_orthotropic_damage_iterative.cc
	M			extra_packages/extra-materials/src/material_damage/material_orthotropic_damage_iterative.hh
	M			extra_packages/extra-materials/src/material_damage/material_orthotropic_damage_tmpl.hh
	M			extra_packages/extra-materials/src/material_damage/material_vreepeerlings_inline_impl.cc
	M			extra_packages/extra-materials/src/material_plastic/material_viscoplastic.cc
	M			extra_packages/extra-materials/test/test_material_damage/test_material_damage_iterative_non_local_parallel.cc
	M			extra_packages/extra-materials/test/test_material_damage/test_material_damage_iterative_non_local_serial.cc
	M			extra_packages/igfem/src/element_class_igfem.hh
	M			extra_packages/igfem/src/igfem_enrichment.cc
	M			extra_packages/igfem/src/material_igfem/material_igfem_elastic.cc
	M			extra_packages/igfem/src/mesh_igfem_spherical_growing_gel_tmpl.hh
	M			extra_packages/igfem/test/patch_tests/test_igfem_triangle_4.cc
	M			extra_packages/igfem/test/patch_tests/test_igfem_triangle_5.cc
	M			extra_packages/igfem/test/patch_tests/test_interface_position.cc
	M			extra_packages/igfem/test/test_solid_mechanics_model_igfem/test_ASR_damage.cc
	M			extra_packages/igfem/test/test_solid_mechanics_model_igfem/test_material_igfem_iterative_stiffness_reduction.cc
	M			extra_packages/igfem/test/test_solid_mechanics_model_igfem/test_material_igfem_iterative_stiffness_reduction_damage_step_transfer.cc
	M			extra_packages/igfem/test/test_solid_mechanics_model_igfem/test_material_igfem_iterative_stiffness_reduction_parallel.cc
	M			extra_packages/igfem/test/test_solid_mechanics_model_igfem/test_solid_mechanics_model_igfem.cc
	M			extra_packages/traction-at-split-node-contact/src/boundary_conditions/force_based_dirichlet.hh
	M			extra_packages/traction-at-split-node-contact/src/common/synchronized_array.cc
	M			extra_packages/traction-at-split-node-contact/src/functions/boundary_functions.cc
	M			extra_packages/traction-at-split-node-contact/src/ntn_contact/friction_laws/ntn_friclaw_coulomb_tmpl.hh
	M			extra_packages/traction-at-split-node-contact/src/ntn_contact/friction_laws/ntn_friclaw_linear_cohesive_tmpl.hh
	M			extra_packages/traction-at-split-node-contact/src/ntn_contact/friction_laws/ntn_friclaw_linear_slip_weakening_no_healing_tmpl.hh
	M			extra_packages/traction-at-split-node-contact/src/ntn_contact/friction_laws/ntn_friclaw_linear_slip_weakening_tmpl.hh
	M			extra_packages/traction-at-split-node-contact/src/ntn_contact/friction_regularisations/ntn_fricreg_no_regularisation.cc
	M			extra_packages/traction-at-split-node-contact/src/ntn_contact/friction_regularisations/ntn_fricreg_rubin_ampuero.cc
	M			extra_packages/traction-at-split-node-contact/src/ntn_contact/friction_regularisations/ntn_fricreg_simplified_prakash_clifton.cc
	M			extra_packages/traction-at-split-node-contact/src/ntn_contact/friction_regularisations/ntn_fricreg_simplified_prakash_clifton.hh
	M			extra_packages/traction-at-split-node-contact/src/ntn_contact/mIIasym_contact.cc
	M			extra_packages/traction-at-split-node-contact/src/ntn_contact/ntn_base_contact.cc
	M			extra_packages/traction-at-split-node-contact/src/ntn_contact/ntn_base_contact.hh
	M			extra_packages/traction-at-split-node-contact/src/ntn_contact/ntn_base_friction.cc
	M			extra_packages/traction-at-split-node-contact/src/ntn_contact/ntn_base_friction.hh
	M			extra_packages/traction-at-split-node-contact/src/ntn_contact/ntn_contact.cc
	M			extra_packages/traction-at-split-node-contact/src/ntn_contact/ntn_initiation_function.hh
	M			packages/core.cmake
	M			packages/solid_mechanics.cmake
	M			python/CMakeLists.txt
	A			python/py11_akantu.cc
	M			python/py_akantu.cc
	M			python/py_group_manager.cc
	M			python/py_model.cc
	M			src/common/aka_array.hh
	A			src/common/aka_array_printer.hh
	M			src/common/aka_array_tmpl.hh
	M			src/common/aka_bbox.hh
	M			src/common/aka_blas_lapack.hh
	M			src/common/aka_circular_array.hh
	M			src/common/aka_common.cc
	M			src/common/aka_common_inline_impl.cc
	M			src/common/aka_csr.hh
	M			src/common/aka_element_classes_info_inline_impl.cc
	M			src/common/aka_error.cc
	M			src/common/aka_error.hh
	M			src/common/aka_grid_dynamic.hh
	M			src/common/aka_iterators.hh
	M			src/common/aka_math.cc
	M			src/common/aka_math.hh
	M			src/common/aka_math_tmpl.hh
	M			src/common/aka_memory.cc
	M			src/common/aka_memory.hh
	M			src/common/aka_random_generator.hh
	M			src/common/aka_safe_enum.hh
	M			src/common/aka_static_memory.cc
	M			src/common/aka_typelist.hh
	M			src/common/aka_types.hh
	M			src/common/aka_visitor.hh
	M			src/common/aka_voigthelper.cc
	M			src/common/aka_voigthelper.hh
	M			src/common/aka_voigthelper_tmpl.hh
	M			src/fe_engine/element.hh
	M			src/fe_engine/element_class.hh
	M			src/fe_engine/element_classes/element_class_hermite_inline_impl.cc
	M			src/fe_engine/element_classes/element_class_hexahedron_20_inline_impl.cc
	M			src/fe_engine/element_classes/element_class_kirchhoff_shell_inline_impl.cc
	M			src/fe_engine/element_classes/element_class_pentahedron_15_inline_impl.cc
	M			src/fe_engine/element_classes/element_class_pentahedron_6_inline_impl.cc
	M			src/fe_engine/element_classes/element_class_triangle_6_inline_impl.cc
	M			src/fe_engine/fe_engine.hh
	M			src/fe_engine/fe_engine_inline_impl.cc
	M			src/fe_engine/fe_engine_template_cohesive.cc
	M			src/fe_engine/fe_engine_template_tmpl_field.hh
	M			src/fe_engine/fe_engine_template_tmpl_struct.hh
	M			src/fe_engine/gauss_integration_tmpl.hh
	M			src/fe_engine/geometrical_element_property.cc
	M			src/fe_engine/geometrical_element_property.hh
	M			src/fe_engine/integration_point.hh
	M			src/fe_engine/integrator_gauss.hh
	M			src/fe_engine/integrator_gauss_inline_impl.cc
	M			src/fe_engine/interpolation_element_tmpl.hh
	M			src/fe_engine/shape_cohesive.hh
	M			src/fe_engine/shape_cohesive_inline_impl.cc
	M			src/fe_engine/shape_functions.cc
	M			src/fe_engine/shape_lagrange_inline_impl.cc
	M			src/fe_engine/shape_structural_inline_impl.cc
	M			src/geometry/aabb_primitives/aabb_primitive.cc
	M			src/geometry/aabb_primitives/aabb_primitive.hh
	M			src/geometry/aabb_primitives/line_arc.hh
	M			src/geometry/aabb_primitives/tetrahedron.hh
	M			src/geometry/aabb_primitives/triangle.hh
	M			src/geometry/geom_helper_functions.hh
	M			src/geometry/mesh_abstract_intersector.hh
	M			src/geometry/mesh_abstract_intersector_tmpl.hh
	M			src/geometry/mesh_geom_abstract.hh
	M			src/geometry/mesh_geom_common.hh
	M			src/geometry/mesh_geom_factory.hh
	M			src/geometry/mesh_geom_factory_tmpl.hh
	M			src/geometry/mesh_geom_intersector.hh
	M			src/geometry/mesh_geom_intersector_tmpl.hh
	M			src/geometry/mesh_segment_intersector.hh
	M			src/geometry/mesh_sphere_intersector.hh
	M			src/geometry/mesh_sphere_intersector_tmpl.hh
	M			src/geometry/tree_type_helper.hh
	M			src/io/dumper/dumper_compute.hh
	M			src/io/dumper/dumper_element_iterator.hh
	M			src/io/dumper/dumper_element_partition.hh
	M			src/io/dumper/dumper_elemental_field.hh
	M			src/io/dumper/dumper_filtered_connectivity.hh
	M			src/io/dumper/dumper_internal_material_field.hh
	M			src/io/dumper/dumper_iohelper_paraview.hh
	M			src/io/dumper/dumper_material_padders.hh
	M			src/io/dumper/dumper_nodal_field.hh
	M			src/io/dumper/dumper_padding_helper.hh
	M			src/io/dumper/dumper_text.hh
	M			src/io/dumper/dumper_type_traits.hh
	M			src/io/mesh_io.cc
	M			src/io/mesh_io/mesh_io_diana.hh
	M			src/io/mesh_io/mesh_io_msh.cc
	M			src/io/mesh_io/mesh_io_msh_struct.cc
	M			src/io/mesh_io/mesh_io_msh_struct.hh
	M			src/io/parser/algebraic_parser.hh
	M			src/io/parser/cppargparse/cppargparse.cc
	M			src/io/parser/cppargparse/cppargparse_tmpl.hh
	M			src/io/parser/input_file_parser.hh
	M			src/io/parser/parameter_registry.cc
	M			src/io/parser/parameter_registry.hh
	M			src/io/parser/parsable.cc
	M			src/io/parser/parser.cc
	M			src/io/parser/parser.hh
	M			src/io/parser/parser_grammar_tmpl.hh
	M			src/io/parser/parser_input_files.cc
	M			src/io/parser/parser_real.cc
	M			src/io/parser/parser_tmpl.hh
	M			src/io/parser/parser_types.cc
	M			src/mesh/element_group.hh
	M			src/mesh/element_type_map.hh
	M			src/mesh/element_type_map_tmpl.hh
	M			src/mesh/group_manager.cc
	M			src/mesh/group_manager.hh
	M			src/mesh/mesh.cc
	M			src/mesh/mesh.hh
	M			src/mesh/mesh_accessor.hh
	M			src/mesh/mesh_data.hh
	M			src/mesh/mesh_data_tmpl.hh
	M			src/mesh/mesh_events.hh
	M			src/mesh/mesh_filter.hh
	M			src/mesh/mesh_global_data_updater.hh
	M			src/mesh/mesh_inline_impl.cc
	M			src/mesh/mesh_iterators.hh
	M			src/mesh/mesh_periodic.cc
	M			src/mesh/node_group.hh
	M			src/mesh/node_group_inline_impl.cc
	M			src/mesh_utils/cohesive_element_inserter.cc
	M			src/mesh_utils/cohesive_element_inserter.hh
	M			src/mesh_utils/cohesive_element_inserter_parallel.cc
	M			src/mesh_utils/global_ids_updater.cc
	M			src/mesh_utils/global_ids_updater.hh
	M			src/mesh_utils/mesh_partition.cc
	M			src/mesh_utils/mesh_partition.hh
	M			src/mesh_utils/mesh_partition/mesh_partition_mesh_data.hh
	M			src/mesh_utils/mesh_partition/mesh_partition_scotch.hh
	M			src/mesh_utils/mesh_utils.cc
	M			src/mesh_utils/mesh_utils.hh
	M			src/mesh_utils/mesh_utils_distribution.hh
	M			src/mesh_utils/mesh_utils_inline_impl.cc
	M			src/mesh_utils/mesh_utils_pbc.cc
	M			src/model/common/boundary_condition/boundary_condition.hh
	M			src/model/common/boundary_condition/boundary_condition_tmpl.hh
	M			src/model/common/dof_manager/dof_manager_default.hh
	M			src/model/common/dof_manager/dof_manager_default_inline_impl.cc
	M			src/model/common/dof_manager/dof_manager_petsc.hh
	M			src/model/common/integration_scheme/generalized_trapezoidal.cc
	M			src/model/common/integration_scheme/integration_scheme.cc
	M			src/model/common/integration_scheme/integration_scheme_1st_order.cc
	M			src/model/common/integration_scheme/integration_scheme_1st_order.hh
	M			src/model/common/integration_scheme/integration_scheme_2nd_order.cc
	M			src/model/common/integration_scheme/integration_scheme_2nd_order.hh
	M			src/model/common/integration_scheme/newmark-beta.cc
	M			src/model/common/integration_scheme/pseudo_time.cc
	M			src/model/common/model_solver.cc
	M			src/model/common/model_solver.hh
	M			src/model/common/non_linear_solver/non_linear_solver.hh
	M			src/model/common/non_linear_solver/non_linear_solver_linear.cc
	M			src/model/common/non_linear_solver/non_linear_solver_linear.hh
	M			src/model/common/non_linear_solver/non_linear_solver_lumped.cc
	M			src/model/common/non_linear_solver/non_linear_solver_newton_raphson.hh
	M			src/model/common/non_linear_solver/non_linear_solver_petsc.cc
	P			src/model/common/non_linear_solver/non_linear_solver_petsc.hh Copied to src/model/solid_mechanics/materials/material_damage/material_anisotropic_damage.hh
	M			src/model/common/non_local_toolbox/base_weight_function_inline_impl.cc
	M			src/model/common/non_local_toolbox/neighborhoods_criterion_evaluation/neighborhood_max_criterion.hh
	M			src/model/common/non_local_toolbox/neighborhoods_criterion_evaluation/neighborhood_max_criterion_inline_impl.cc
	M			src/model/common/non_local_toolbox/non_local_manager.cc
	M			src/model/common/non_local_toolbox/non_local_neighborhood_base.cc
	M			src/model/common/solver_callback.hh
	M			src/model/common/time_step_solvers/time_step_solver_default_explicit.hh
	M			src/model/heat_transfer/heat_transfer_model.cc
	M			src/model/model_inline_impl.cc
	M			src/model/model_options.hh
	M			src/model/solid_mechanics/material.cc
	M			src/model/solid_mechanics/material.hh
	M			src/model/solid_mechanics/material_inline_impl.cc
	M			src/model/solid_mechanics/materials/internal_field.hh
	M			src/model/solid_mechanics/materials/internal_field_tmpl.hh
	A			src/model/solid_mechanics/materials/material_damage/material_anisotropic_damage.cc
	P			src/model/solid_mechanics/materials/material_damage/material_anisotropic_damage.hh Copied from src/model/common/non_linear_solver/non_linear_solver_petsc.hh
	A			src/model/solid_mechanics/materials/material_damage/material_anisotropic_damage_tmpl.hh
	M			src/model/solid_mechanics/materials/material_damage/material_damage.hh
	M			src/model/solid_mechanics/materials/material_damage/material_damage_tmpl.hh
	M			src/model/solid_mechanics/materials/material_damage/material_marigo.hh
	M			src/model/solid_mechanics/materials/material_damage/material_marigo_inline_impl.cc
	M			src/model/solid_mechanics/materials/material_damage/material_mazars_inline_impl.cc
	M			src/model/solid_mechanics/materials/material_elastic.cc
	M			src/model/solid_mechanics/materials/material_elastic.hh
	M			src/model/solid_mechanics/materials/material_elastic_inline_impl.cc
	M			src/model/solid_mechanics/materials/material_elastic_linear_anisotropic.cc
	M			src/model/solid_mechanics/materials/material_elastic_linear_anisotropic.hh
	M			src/model/solid_mechanics/materials/material_elastic_linear_anisotropic_inline_impl.cc
	M			src/model/solid_mechanics/materials/material_elastic_orthotropic.hh
	M			src/model/solid_mechanics/materials/material_embedded/material_reinforcement.hh
	M			src/model/solid_mechanics/materials/material_embedded/material_reinforcement_tmpl.hh
	M			src/model/solid_mechanics/materials/material_finite_deformation/material_neohookean.cc
	M			src/model/solid_mechanics/materials/material_plastic/material_linear_isotropic_hardening.cc
	M			src/model/solid_mechanics/materials/material_plastic/material_linear_isotropic_hardening.hh
	M			src/model/solid_mechanics/materials/material_plastic/material_linear_isotropic_hardening_inline_impl.cc
	M			src/model/solid_mechanics/materials/material_plastic/material_plastic_inline_impl.cc
	M			src/model/solid_mechanics/materials/material_thermal.cc
	M			src/model/solid_mechanics/materials/material_thermal.hh
	M			src/model/solid_mechanics/materials/material_viscoelastic/material_standard_linear_solid_deviatoric.cc
	M			src/model/solid_mechanics/materials/plane_stress_toolbox.hh
	M			src/model/solid_mechanics/materials/random_internal_field.hh
	M			src/model/solid_mechanics/materials/random_internal_field_tmpl.hh
	M			src/model/solid_mechanics/materials/weight_functions/remove_damaged_with_damage_rate_weight_function.hh
	M			src/model/solid_mechanics/materials/weight_functions/stress_based_weight_function.cc
	M			src/model/solid_mechanics/materials/weight_functions/stress_based_weight_function.hh
	M			src/model/solid_mechanics/solid_mechanics_model.cc
	M			src/model/solid_mechanics/solid_mechanics_model.hh
	M			src/model/solid_mechanics/solid_mechanics_model_cohesive/fragment_manager.cc
	M			src/model/solid_mechanics/solid_mechanics_model_cohesive/fragment_manager.hh
	M			src/model/solid_mechanics/solid_mechanics_model_cohesive/material_selector_cohesive.hh
	M			src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/cohesive_internal_field.hh
	M			src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/cohesive_internal_field_tmpl.hh
	M			src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/constitutive_laws/material_cohesive_bilinear.hh
	M			src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/constitutive_laws/material_cohesive_exponential.cc
	M			src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/constitutive_laws/material_cohesive_exponential.hh
	M			src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/constitutive_laws/material_cohesive_linear.cc
	M			src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/constitutive_laws/material_cohesive_linear.hh
	M			src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/constitutive_laws/material_cohesive_linear_fatigue.cc
	M			src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/constitutive_laws/material_cohesive_linear_fatigue.hh
	M			src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/constitutive_laws/material_cohesive_linear_friction.cc
	M			src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/constitutive_laws/material_cohesive_linear_friction.hh
	M			src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/constitutive_laws/material_cohesive_linear_inline_impl.cc
	M			src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/constitutive_laws/material_cohesive_linear_uncoupled.cc
	M			src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/constitutive_laws/material_cohesive_linear_uncoupled.hh
	M			src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/material_cohesive.cc
	M			src/model/solid_mechanics/solid_mechanics_model_cohesive/materials/material_cohesive_inline_impl.cc
	M			src/model/solid_mechanics/solid_mechanics_model_cohesive/solid_mechanics_model_cohesive.cc
	M			src/model/solid_mechanics/solid_mechanics_model_cohesive/solid_mechanics_model_cohesive_inline_impl.cc
	M			src/model/solid_mechanics/solid_mechanics_model_cohesive/solid_mechanics_model_cohesive_parallel.cc
	M			src/model/solid_mechanics/solid_mechanics_model_embedded_interface/embedded_interface_intersector.hh
	M			src/model/solid_mechanics/solid_mechanics_model_embedded_interface/embedded_interface_model.cc
	M			src/model/solid_mechanics/solid_mechanics_model_embedded_interface/embedded_interface_model.hh
	M			src/model/solid_mechanics/solid_mechanics_model_event_handler.hh
	M			src/model/solid_mechanics/solid_mechanics_model_io.cc
	M			src/model/solid_mechanics/solid_mechanics_model_mass.cc
	M			src/model/solid_mechanics/solid_mechanics_model_material.cc
	M			src/model/structural_mechanics/structural_elements/structural_element_bernoulli_beam_3.hh
	M			src/model/structural_mechanics/structural_elements/structural_element_kirchhoff_shell.hh
	M			src/model/structural_mechanics/structural_mechanics_model.cc
	M			src/model/structural_mechanics/structural_mechanics_model_boundary.cc
	M			src/model/structural_mechanics/structural_mechanics_model_mass.cc
	M			src/solver/petsc_wrapper.hh
	M			src/solver/solver_petsc.hh
	M			src/solver/solver_vector.hh
	M			src/solver/solver_vector_default.cc
	M			src/solver/solver_vector_default.hh
	M			src/solver/solver_vector_default_tmpl.hh
	M			src/solver/solver_vector_petsc.hh
	M			src/solver/sparse_matrix.cc
	M			src/solver/sparse_matrix.hh
	M			src/solver/sparse_matrix_aij_inline_impl.cc
	M			src/solver/sparse_matrix_inline_impl.cc
	M			src/solver/sparse_matrix_petsc.cc
	M			src/solver/sparse_matrix_petsc.hh
	M			src/solver/sparse_solver.cc
	M			src/solver/sparse_solver.hh
	M			src/solver/sparse_solver_mumps.cc
	M			src/solver/sparse_solver_mumps.hh
	M			src/solver/terms_to_assemble.hh
	M			src/synchronizer/communication_buffer.hh
	M			src/synchronizer/communication_buffer_inline_impl.cc
	M			src/synchronizer/communication_descriptor_tmpl.hh
	M			src/synchronizer/communication_request.hh
	M			src/synchronizer/communication_tag.hh
	M			src/synchronizer/communications_tmpl.hh
	M			src/synchronizer/communicator_event_handler.hh
	M			src/synchronizer/communicator_mpi_inline_impl.cc
	M			src/synchronizer/data_accessor.cc
	M			src/synchronizer/data_accessor.hh
	M			src/synchronizer/dof_synchronizer.cc
	M			src/synchronizer/dof_synchronizer.hh
	M			src/synchronizer/dof_synchronizer_inline_impl.cc
	M			src/synchronizer/element_info_per_processor.cc
	M			src/synchronizer/element_info_per_processor.hh
	M			src/synchronizer/element_info_per_processor_tmpl.hh
	M			src/synchronizer/element_synchronizer.cc
	M			src/synchronizer/grid_synchronizer.cc
	M			src/synchronizer/master_element_info_per_processor.cc
	M			src/synchronizer/node_info_per_processor.hh
	M			src/synchronizer/node_synchronizer.cc
	M			src/synchronizer/node_synchronizer.hh
	M			src/synchronizer/periodic_node_synchronizer.hh
	M			src/synchronizer/synchronizer_registry.cc
	M			src/synchronizer/synchronizer_registry.hh
	M			src/synchronizer/synchronizer_tmpl.hh
	M			test/ci/Dockerfile
	M			test/ci/scripts/harbomaster/arclint.py
	M			test/ci/scripts/harbomaster/ctestresults.py
	M			test/ci/scripts/harbomaster/hbm.py
	M			test/ci/scripts/harbomaster/results.py
	M			test/ci/scripts/hbm
	M			test/python_fe/__init__.py
	M			test/test_common/test_grid.cc
	M			test/test_common/test_iterators.cc
	M			test/test_common/test_tensors.cc
	M			test/test_fe_engine/py_engine/__init__.py
	M			test/test_fe_engine/py_engine/py_engine.py
	M			test/test_fe_engine/test_fe_engine_gauss_integration.cc
	M			test/test_fe_engine/test_fe_engine_precomputation.cc
	M			test/test_fe_engine/test_fe_engine_precomputation_bernoulli_3.cc
	M			test/test_fe_engine/test_integrate.cc
	M			test/test_geometry/test_segment_intersection_tetrahedron_4.cc
	M			test/test_gtest_main.cc
	M			test/test_io/test_dumper/test_dumper.cc
	M			test/test_mesh/test_mesh_periodic.cc
	M			test/test_mesh_utils/test_mesh_iterators.cc
	M			test/test_model/patch_tests/patch_test_linear_anisotropic.cc
	M			test/test_model/patch_tests/patch_test_linear_fixture.hh
	M			test/test_model/test_common/test_dof_manager.cc
	M			test/test_model/test_common/test_model_solver/test_dof_manager_default.cc
	M			test/test_model/test_common/test_model_solver/test_model_solver.cc
	M			test/test_model/test_common/test_model_solver/test_model_solver_dynamic.cc
	M			test/test_model/test_common/test_model_solver/test_model_solver_dynamic.py
	M			test/test_model/test_common/test_model_solver/test_model_solver_dynamic_petsc.cc
	M			test/test_model/test_common/test_model_solver/test_model_solver_my_model.hh
	M			test/test_model/test_common/test_non_local_toolbox/plot_neighborhoods.py
	M			test/test_model/test_common/test_non_local_toolbox/test_build_neighborhood_parallel.cc
	M			test/test_model/test_common/test_non_local_toolbox/test_non_local_averaging.cc
	M			test/test_model/test_solid_mechanics_model/test_cohesive/test_cohesive_fixture.hh
	M			test/test_model/test_solid_mechanics_model/test_cohesive/test_cohesive_insertion/test_cohesive_insertion_along_physical_surfaces.cc
	M			test/test_model/test_solid_mechanics_model/test_cohesive/test_cohesive_linear_friction/test_cohesive_friction.cc
	M			test/test_model/test_solid_mechanics_model/test_cohesive/test_materials/test_material_cohesive_fixture.hh
	M			test/test_model/test_solid_mechanics_model/test_cohesive/test_materials/test_material_cohesive_linear.cc
	M			test/test_model/test_solid_mechanics_model/test_energies/test_solid_mechanics_model_linear_elastic_potential_energy.cc
	M			test/test_model/test_solid_mechanics_model/test_materials/py_mazars.py
	M			test/test_model/test_solid_mechanics_model/test_materials/test_elastic_materials.cc
	M			test/test_model/test_solid_mechanics_model/test_materials/test_finite_def_materials.cc
	M			test/test_model/test_solid_mechanics_model/test_materials/test_local_material.cc
	M			test/test_model/test_solid_mechanics_model/test_materials/test_material_elasto_plastic_linear_isotropic_hardening/test_material_elasto_plastic_linear_isotropic_hardening.cc
	M			test/test_model/test_solid_mechanics_model/test_materials/test_material_fixtures.hh
	M			test/test_model/test_solid_mechanics_model/test_materials/test_material_mazars.cc
	M			test/test_model/test_solid_mechanics_model/test_materials/test_material_thermal.cc
	M			test/test_model/test_solid_mechanics_model/test_materials/test_material_viscoelastic/test_material_standard_linear_solid_deviatoric_relaxation.cc
	M			test/test_model/test_solid_mechanics_model/test_materials/test_material_viscoelastic_maxwell/test_material_viscoelastic_maxwell_relaxation.cc
	M			test/test_model/test_solid_mechanics_model/test_materials/test_plastic_materials.cc
	M			test/test_model/test_solid_mechanics_model/test_solid_mechanics_model_material_eigenstrain.cc
	M			test/test_model/test_structural_mechanics_model/test_structural_mechanics_model_bernoulli_beam_dynamics.cc
	M			test/test_python_interface/test_pybind.py
	M			test/test_solver/test_solver_petsc.cc
	M			test/test_solver/test_sparse_matrix_product.cc
	M			test/test_solver/test_sparse_solver_mumps.cc
	M			test/test_synchronizer/test_communicator.cc
	M			test/test_synchronizer/test_data_distribution.cc
	M			test/test_synchronizer/test_dof_synchronizer_communication.cc
	M			test/test_synchronizer/test_facet_synchronizer.cc
	M			test/test_synchronizer/test_grid_synchronizer.cc
	M			test/test_synchronizer/test_node_synchronizer.cc
	M			test/test_synchronizer/test_synchronizer_communication.cc
	M			third-party/cmake/gtest.cmake