diff --git a/src/reactmicp/reactmicp_chloride.hpp b/src/reactmicp/reactmicp_chloride.hpp index c0928b5..142bb48 100644 --- a/src/reactmicp/reactmicp_chloride.hpp +++ b/src/reactmicp/reactmicp_chloride.hpp @@ -1,55 +1,56 @@ /* ============================================================================= Copyright (c) 2014-2017 F. Georget Princeton University Copyright (c) 2017 F. Georget EPFL All rights reserved. Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: 1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. 2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. 3. Neither the name of the copyright holder nor the names of its contributors may be used to endorse or promote products derived from this software without specific prior written permission. * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. * ============================================================================= */ //! \file reactmicp_chloride.hpp //! \brief ReactMiCP system for advection-diffusion with species-dependent //! diffusion coefficients #ifndef SPECMICP_REACMICP_CHLORIDE_HPP #define SPECMICP_REACMICP_CHLORIDE_HPP // Core files #include "reactmicp_core.hpp" // System #include "reactmicp/systems/chloride/variables.hpp" -#include "reactmicp/systems/chloride/init_variables.hpp" +//#include "reactmicp/systems/chloride/init_variables.hpp" +#include "reactmicp/systems/chloride/boundary_conditions.hpp" #include "reactmicp/systems/chloride/transport_stagger.hpp" #include "reactmicp/systems/chloride/equilibrium_stagger.hpp" #endif // SPECMICP_REACMICP_CHLORIDE_HPP diff --git a/src/reactmicp/systems/chloride/CMakeLists.txt b/src/reactmicp/systems/chloride/CMakeLists.txt index ae40aad..8d975e0 100644 --- a/src/reactmicp/systems/chloride/CMakeLists.txt +++ b/src/reactmicp/systems/chloride/CMakeLists.txt @@ -1,37 +1,38 @@ set( reactmicp_chloride_srcs variables.cpp variables_interface.cpp boundary_conditions.cpp transport_program.cpp #jacobian_approximation.cpp transport_stagger.cpp equilibrium_stagger.cpp ) set( reactmicp_chloride_headers + init_variables.hpp variables.hpp variablesfwd.hpp variables_interface.hpp dof_numbering.hpp boundary_conditions.hpp transport_program.hpp transport_program_struct.hpp #jacobian_approximation.hpp transport_stagger.hpp chem_stagger_base.hpp equilibrium_stagger.hpp ) add_to_reactmicp_srcs_list(reactmicp_chloride_srcs) add_to_reactmicp_headers_list(reactmicp_chloride_headers) INSTALL(FILES ${reactmicp_chloride_headers} DESTINATION ${INCLUDE_INSTALL_DIR}/reactmicp/systems/chloride ) diff --git a/src/reactmicp/systems/chloride/init_variables.hpp b/src/reactmicp/systems/chloride/init_variables.hpp new file mode 100644 index 0000000..e69de29