copy_from_UNIL_NAS_to_scratch.sh
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copy_from_UNIL_NAS_to_scratch.sh
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			#!/bin/bash
			#
			# DCSR, UNIL
			# HPC Introduction course examples
			#
			# Aim of the script:
			# copy a file from the UNIL NAS to your scratch space on a cluster
			#
			# What has to be done:
			# adapt $SCRATCH_DIR
			#
			# How to run it:
			# sh copy_from_UNIL_NAS_to_scratch.sh
			#

			# Do not change the following definitions!
			#
			SERVER=dexwin.unil.ch # Do not change!
			FILENAME=CopyMe.txt # Do not change!
			DIRNAME=DirToCopy # Do not change!
			REMOTE_DIR=CTR/CI/DCSR/rfabbret/test_movedat/D2c/DCSR-Examples # Do not change!

			CLUSTER=wally


			# You must adapt SCRATCH_DIR to your scratch
			SCRATCH_DIR=/scratch/$CLUSTER/CTR/CI/DCSR/rfabbret/test_movedat # Adapt!

			# Check that the scratch folder actually exists
			#
			if [ ! -d $SCRATCH_DIR ]; then
			echo "FATAL: destination folder ($SCRATCH_DIR) does not exist!"
			exit 1
			fi


			# List the content of a repository on the UNIL NAS
			#
			movedat $USER@$SERVER:$REMOTE_DIR/ # Must be ending by "/"


			# Copy the file $FILENAME (CopyMe.txt) from UNIL NAS to your scratch directory
			#
			movedat $USER@$SERVER:$REMOTE_DIR/$FILENAME $SCRATCH_DIR/

			# List content of SCRATCH_DIR
			#
			ls -rtl $SCRATCH_DIR


			# Copy the directory $DIRNAME (DirToCopy) from UNIL NAS to your scratch directory
			# Note: with '-h' option you copy file-by-file
			# with '-i' option you enable streaming mode
			#
			movedat -h $USER@$SERVER:$REMOTE_DIR/$DIRNAME $SCRATCH_DIR

			#EO TODO: fails in streaming mode... check why
			###movedat -i $USER@$SERVER:$REMOTE_DIR/$DIRNAME $SCRATCH_DIR


			# List content of SCRATCH_DIR
			#
			ls -rtl $SCRATCH_DIR