Intersubj_pipeline/JOVE_PlotAtlasTC.m
1e8388117cefmaster

JOVE_PlotAtlasTC.m
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			function [h,t_start,t_end] = JOVE_PlotAtlasTC(h,TC,idx,DataType,W,S,TR)

			cla(h);
			pause(1);

			n_TP = size(TC,2);

			hold(h,'on');

			if length(idx) > 10
			CM = cbrewer('div','Spectral',length(idx));
			else
			CM = cbrewer('qual','Set1',length(idx));
			end

			tmp = TC(idx,:);
			tmp = tmp(:);
			range = [-max(abs(tmp)),max(abs(tmp))];

			switch DataType
			case 'Atlas'
			for i = 1:length(idx)
			plot(h,0:TR:(n_TP-1)*TR,TC(idx(i),:),'color',CM(i,:),'Linewidth',2);
			end

			if isnan(range(1)) \|\| isnan(range(2))
			axis(h,[0,(n_TP-1)*TR,0,1]);
			else
			axis(h,[0,(n_TP-1)*TR,range(1),range(2)]);
			end

			xlabel(h,'Time [s]');
			ylabel(h,'Atlased time courses [a.u.]');

			case 'ISFC'

			t_start = (TR*W)-1;
			t_end = (size(TC,2)-1)*TR + t_start;

			for i = 1:length(idx)
			plot(h,t_start:S*TR:t_end,TC(idx(i),:),'color',CM(i,:),'Linewidth',2);
			end

			if isnan(range(1)) \|\| isnan(range(2))
			axis(h,[t_start,t_end,0,1]);
			else
			axis(h,[t_start,t_end,-1,1]);
			end

			xlabel(h,'Time [s]');
			ylabel(h,'ISFC [-]');


			otherwise

			end



			end