PlotChimera.py
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	#Input Stuff
	import MiscParameters as pm
	import numpy as np
	import Functions as f
	import os
	import matplotlib.pyplot as plt
	from tkinter import Tk
	from tkinter.filedialog import askopenfilenames
	from tkinter.filedialog import askopenfilename
	from matplotlib.font_manager import FontProperties
	fontP = FontProperties()
	fontP.set_size('small')
	pm.init(LoadFiles = 0)
	root = Tk()
	root.withdraw()
	os.system('''/usr/bin/osascript -e 'tell app "Finder" to set frontmost of process "python" to true' ''')

	# Load File, empty string prompts a pop.up window for file selection. Else a file-path can be given

	LP = 10e3

	root.update()
	filenames = askopenfilenames()
	root.destroy()

	for filename in filenames:
	print(filename)
	inp = f.OpenFile(filename, ChimeraLowPass=LP, approxImpulseResponse=True)
	folder = pm.OutputFolder
	file = os.sep + str(os.path.split(filename)[1][:-4])
	print('Number of samples in file: {}'.format(len(inp['i1'])))
	if not os.path.exists(folder):
	os.makedirs(folder)
	fig = plt.figure(1, figsize=(16, 5))
	ax = fig.add_subplot(111)
	ax.plot(np.arange(0, len(inp['i1'][100:]))/inp['samplerate'], inp['i1'][100:]*1e9)
	ax.set_ylabel('Current (nA)')
	ax.set_xlabel('Time (s)')
	#plt.show()
	fig.savefig('/Volumes/lben/lben-commun/2018 User Data/Publications/Ke-ssdsDNA/raw materials/raw chimera traces/'+ file+'.pdf', transparent=True)
	ax.clear()
	fig.clear()