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PlottingCSVfile.py
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Created
Thu, May 30, 08:05
Size
1 KB
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text/x-python
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Sat, Jun 1, 08:05 (1 d, 23 h)
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blob
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Raw Data
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17959414
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rNPTOOLS Nanopore Tools
PlottingCSVfile.py
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import
sys
import
os
import
matplotlib.pyplot
as
plt
import
pandas
as
pd
import
numpy
as
np
from
tkinter.filedialog
import
askopenfilenames
#Updated 23-11-2018
filenames
=
askopenfilenames
()
for
filename
in
filenames
:
#Update your column names
data_file
=
pd
.
read_csv
(
filename
)
#For Excel files or csv files change yourself
column1
=
data_file
[
'x000'
]
#x-axis data
column2
=
data_file
[
'y000)'
]
#y-axis data 1
#column3 = data_file ['Put column 3 name here'] #y-axis data 2 #Uncomment if you have multiple y-axis data e.g. column 3 etc
# Aesthetics: comment the part that starts from marker stuff if not required
plt
.
plot
(
column1
,
column2
,
marker
=
'.'
,
markerfacecolor
=
'blue'
,
markersize
=
12
,
color
=
'red'
,
linewidth
=
4
)
plt
.
xscale
(
'log'
)
plt
.
title
(
'MoS2 nanopore ionic current, 300 mV, 1M KCl, pH 7.5'
)
plt
.
grid
(
True
)
#plt.plot (column1, column3, marker='', color='olive', linewidth=2, linestyle='dashed', label="toto")
plt
.
xlabel
(
'Time (ks)'
)
and
plt
.
ylabel
(
'Current (nA)'
)
plt
.
show
()
#print (data_file) just in case if u want to see wht you are actually printing, sometimes the plot is reversed!!!
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