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Nanopore-tools/Plotting/PlotDataWithFileBrowser.py
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PlotDataWithFileBrowser.py
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from pyqtgraph.flowchart import Flowchart
from pyqtgraph.Qt import QtGui, QtCore
import pyqtgraph as pg
import numpy as np
import pyqtgraph.metaarray as metaarray
app = QtGui.QApplication([])
## Create main window with grid layout
win = QtGui.QMainWindow()
win.setWindowTitle('pyqtgraph example: Flowchart')
cw = QtGui.QWidget()
win.setCentralWidget(cw)
layout = QtGui.QGridLayout()
cw.setLayout(layout)
## Create flowchart, define input/output terminals
fc = Flowchart(terminals={
'dataIn': {'io': 'in'},
'dataOut': {'io': 'out'}
})
w = fc.widget()
## Add flowchart control panel to the main window
layout.addWidget(fc.widget(), 0, 0, 3, 1)
## Add two plot widgets
pw1 = pg.PlotWidget()
pw2 = pg.PlotWidget()
pw3 = pg.PlotWidget()
layout.addWidget(pw1, 0, 1)
layout.addWidget(pw2, 1, 1)
layout.addWidget(pw3, 2, 1)
win.show()
## generate signal data to pass through the flowchart
data = np.random.normal(size=1000)
data[200:300] += 1
data += np.sin(np.linspace(0, 100, 1000))
data = metaarray.MetaArray(data, info=[{'name': 'Time', 'values': np.linspace(0, 1.0, len(data))}, {}])
## Feed data into the input terminal of the flowchart
fc.setInput(dataIn=data)
## populate the flowchart with a basic set of processing nodes.
## (usually we let the user do this)
plotList = {'Top Plot': pw1, 'Bottom Plot': pw2}
pw1Node = fc.createNode('PlotWidget', pos=(0, -150))
pw1Node.setPlotList(plotList)
pw1Node.setPlot(pw1)
pw2Node = fc.createNode('PlotWidget', pos=(150, -150))
pw2Node.setPlot(pw2)
pw2Node.setPlotList(plotList)
pw3Node = fc.createNode('PlotWidget', pos=(150, -150))
pw3Node.setPlot(pw3)
pw3Node.setPlotList(plotList)
fNode = fc.createNode('GaussianFilter', pos=(0, 0))
fNode.ctrls['sigma'].setValue(5)
fc.connectTerminals(fc['dataIn'], fNode['In'])
fc.connectTerminals(fc['dataIn'], pw1Node['In'])
fc.connectTerminals(fNode['Out'], pw2Node['In'])
fc.connectTerminals(fNode['Out'], fc['dataOut'])
## Start Qt event loop unless running in interactive mode or using pyside.
if __name__ == '__main__':
import sys
if (sys.flags.interactive != 1) or not hasattr(QtCore, 'PYQT_VERSION'):
QtGui.QApplication.instance().exec_()
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