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OrientationJ/src/orientationj/ShowingOptionsDialog.java
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ShowingOptionsDialog.java
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//==============================================================================
//
// Project: Directional Image Analysis - OrientationJ plugin
//
// Author: Daniel Sage
//
// Organization: Biomedical Imaging Group (BIG)
// Ecole Polytechnique Federale de Lausanne (EPFL), Lausanne, Switzerland
//
// Information:
// OrientationJ: http://bigwww.epfl.ch/demo/orientation/
// MonogenicJ: http://bigwww.epfl.ch/demo/monogenic/
//
//
// Reference on methods and plugin
// Z. Püspöki, M. Storath, D. Sage, M. Unser
// "Transforms and Operators for Directional Bioimage Analysis: A Survey,"
// Advances in Anatomy, Embryology and Cell Biology, vol. 219, Focus on Bio-Image Informatics,
// Springer International Publishing, ch. 3, pp. 69-93, May 21, 2016.
//
// Reference on applications
// E. Fonck, G.G. Feigl, J. Fasel, D. Sage, M. Unser, D.A. Ruefenacht, N. Stergiopulos
// "Effect of Aging on Elastin Functionality in Human Cerebral Arteries,"
// Stroke, vol. 40, no. 7, pp. 2552-2556, July 2009.
//
// R. Rezakhaniha, A. Agianniotis, J.T.C. Schrauwen, A. Griffa, D. Sage, C.V.C. Bouten, F.N. van de Vosse, M. Unser, N. Stergiopulos
// "Experimental Investigation of Collagen Waviness and Orientation in the Arterial Adventitia Using Confocal Laser Scanning Microscopy,"
// Biomechanics and Modeling in Mechanobiology, vol. 11, no. 3-4, pp. 461-473, 2012.
// Conditions of use: You'll be free to use this software for research purposes,
// but you should not redistribute it without our consent. In addition, we
// expect you to include a citation or acknowledgment whenever you present or
// publish results that are based on it.
//
// History:
// - Updated (Daniel Sage, 24 January 2011)
// - Added the Vector field (Daniel Sage, 1 March 2017)
//
//==============================================================================
package orientationj;
import java.awt.BorderLayout;
import java.awt.Color;
import java.awt.FlowLayout;
import java.awt.GridBagConstraints;
import java.awt.GridBagLayout;
import java.awt.Insets;
import java.awt.event.ActionEvent;
import java.awt.event.ActionListener;
import java.awt.event.WindowEvent;
import java.awt.event.WindowListener;
import javax.swing.BorderFactory;
import javax.swing.JButton;
import javax.swing.JColorChooser;
import javax.swing.JComponent;
import javax.swing.JDialog;
import javax.swing.JFrame;
import javax.swing.JLabel;
import javax.swing.JPanel;
import javax.swing.JTextField;
import ij.gui.GUI;
import orientation.OrientationParameters;
public class ShowingOptionsDialog extends JDialog implements ActionListener, WindowListener {
private GridBagLayout layout = new GridBagLayout();
private GridBagConstraints constraint = new GridBagConstraints();
private JTextField txtEllipseThickness = new JTextField(" ", 5);
private JTextField txtEllipseOpacity = new JTextField(" ", 5);
private JTextField txtEllipseR = new JTextField(" ", 5);
private JTextField txtEllipseG = new JTextField(" ", 5);
private JTextField txtEllipseB = new JTextField(" ", 5);
private JButton bnEllipseColor = new JButton("Choose...");
private JTextField txtAreaOpacity = new JTextField(" ", 5);
private JTextField txtAreaR = new JTextField(" ", 5);
private JTextField txtAreaG = new JTextField(" ", 5);
private JTextField txtAreaB = new JTextField(" ", 5);
private JTextField txtSigma = new JTextField("0", 5);
private JButton bnAreaColor = new JButton("Choose...");
private JButton bnOK = new JButton("OK");
private OrientationParameters params;
public ShowingOptionsDialog(OrientationParameters params) {
super(new JFrame(), "Options");
this.params = params;
JPanel pnPrefilter = new JPanel(layout);
pnPrefilter.setBorder(BorderFactory.createTitledBorder("Prefilter"));
addComponent(pnPrefilter, 1, 0, 1, 1, 2, new JLabel("Laplacian of Gaussian (sigma)"));
addComponent(pnPrefilter, 1, 3, 1, 1, 2, txtSigma);
JPanel pnEllipse = new JPanel(layout);
pnEllipse.setBorder(BorderFactory.createTitledBorder("Ellipse"));
addComponent(pnEllipse, 1, 0, 1, 1, 2, new JLabel("Thickness"));
addComponent(pnEllipse, 1, 3, 1, 1, 2, txtEllipseThickness);
addComponent(pnEllipse, 2, 0, 1, 1, 2, new JLabel("Opacity [0-100]"));
addComponent(pnEllipse, 2, 3, 1, 1, 2, txtEllipseOpacity);
addComponent(pnEllipse, 3, 0, 1, 1, 2, new JLabel("Color"));
addComponent(pnEllipse, 3, 1, 1, 1, 2, txtEllipseR);
addComponent(pnEllipse, 3, 2, 1, 1, 2, txtEllipseG);
addComponent(pnEllipse, 3, 3, 1, 1, 2, txtEllipseB);
addComponent(pnEllipse, 3, 4, 1, 1, 2, bnEllipseColor);
JPanel pnArea = new JPanel(layout);
pnArea.setBorder(BorderFactory.createTitledBorder("Area"));
addComponent(pnArea, 1, 0, 1, 1, 2, new JLabel("Opacity [0-100]"));
addComponent(pnArea, 1, 3, 1, 1, 2, txtAreaOpacity);
addComponent(pnArea, 2, 0, 1, 1, 2, new JLabel("Color"));
addComponent(pnArea, 2, 1, 1, 1, 2, txtAreaR);
addComponent(pnArea, 2, 2, 1, 1, 2, txtAreaG);
addComponent(pnArea, 2, 3, 1, 1, 2, txtAreaB);
addComponent(pnArea, 2, 4, 1, 1, 2, bnAreaColor);
JPanel pnButton = new JPanel(new FlowLayout());
pnButton.add(bnOK);
JPanel pnMain = new JPanel(layout);
addComponent(pnMain, 0, 0, 1, 1, 8, pnPrefilter);
addComponent(pnMain, 1, 0, 1, 1, 8, pnEllipse);
addComponent(pnMain, 2, 0, 1, 1, 8, pnArea);
addComponent(pnMain, 3, 0, 1, 1, 8, pnButton);
bnOK.addActionListener(this);
bnEllipseColor.addActionListener(this);
bnAreaColor.addActionListener(this);
addWindowListener(this);
setLayout(new BorderLayout());
getContentPane().add(pnMain);
updateInterface();
pack();
setModal(true);
setResizable(false);
GUI.center(this);
setVisible(true);
}
/**
* Add a component in a panel in the northwest of the cell.
*/
private void addComponent(JPanel pn, int row, int col, int width, int height, int space, JComponent comp) {
constraint.gridx = col;
constraint.gridy = row;
constraint.gridwidth = width;
constraint.gridheight = height;
constraint.anchor = GridBagConstraints.NORTHWEST;
constraint.insets = new Insets(space, space, space, space);
constraint.fill = GridBagConstraints.HORIZONTAL;
layout.setConstraints(comp, constraint);
pn.add(comp);
}
/**
* Implements the actionPerformed for the ActionListener.
*/
public synchronized void actionPerformed(ActionEvent e) {
params.sigmaLoG = (new Double(txtSigma.getText())).doubleValue();
params.colorEllipseR = (new Integer(txtEllipseR.getText())).intValue();
params.colorEllipseG = (new Integer(txtEllipseG.getText())).intValue();
params.colorEllipseB = (new Integer(txtEllipseB.getText())).intValue();
params.colorEllipseOpacity = (new Integer(txtEllipseOpacity.getText())).intValue();
params.colorEllipseThickness = (new Double(txtEllipseThickness.getText())).doubleValue();
params.colorAreaR = (new Integer(txtAreaR.getText())).intValue();
params.colorAreaG = (new Integer(txtAreaG.getText())).intValue();
params.colorAreaB = (new Integer(txtAreaB.getText())).intValue();
params.colorAreaOpacity = (new Integer(txtAreaOpacity.getText())).intValue();
if (e.getSource() == bnOK) {
dispose();
}
else if (e.getSource() == bnEllipseColor) {
Color c = JColorChooser.showDialog(this, "Choose a color for the ellipse", new Color(params.colorEllipseR, params.colorEllipseG, params.colorEllipseB));
params.colorEllipseR = c.getRed();
params.colorEllipseG = c.getGreen();
params.colorEllipseB = c.getBlue();
}
else if (e.getSource() == bnAreaColor) {
Color c = JColorChooser.showDialog(this, "Choose a color for the area", new Color(params.colorAreaR, params.colorAreaG, params.colorAreaB));
params.colorAreaR = c.getRed();
params.colorAreaG = c.getGreen();
params.colorAreaB = c.getBlue();
}
updateInterface();
}
private void updateInterface() {
txtSigma.setText(""+params.sigmaLoG);
txtEllipseR.setText(""+params.colorEllipseR);
txtEllipseG.setText(""+params.colorEllipseG);
txtEllipseB.setText(""+params.colorEllipseB);
txtEllipseOpacity.setText(""+params.colorEllipseOpacity);
txtEllipseThickness.setText(""+params.colorEllipseThickness);
txtAreaR.setText(""+params.colorAreaR);
txtAreaG.setText(""+params.colorAreaG);
txtAreaB.setText(""+params.colorAreaB);
txtAreaOpacity.setText(""+params.colorAreaOpacity);
}
/**
* Implements the methods for the WindowListener.
*/
public void windowActivated(WindowEvent e) {}
public void windowClosed(WindowEvent e) {}
public void windowDeactivated(WindowEvent e) {}
public void windowDeiconified(WindowEvent e) {}
public void windowIconified(WindowEvent e) {}
public void windowOpened(WindowEvent e) {}
public void windowClosing(WindowEvent e) {
dispose();
}
}
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