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sampling_engine_pivoted_pod.py
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Fri, May 3, 22:24
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text/x-python
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R6746 RationalROMPy
sampling_engine_pivoted_pod.py
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# Copyright (C) 2018 by the RROMPy authors
#
# This file is part of RROMPy.
#
# RROMPy is free software: you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# RROMPy is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with RROMPy. If not, see <http://www.gnu.org/licenses/>.
#
import
numpy
as
np
from
copy
import
deepcopy
as
copy
from
rrompy.sampling.base.pod_engine
import
PODEngine
from
.sampling_engine_pivoted
import
SamplingEnginePivoted
from
rrompy.utilities.base.types
import
Np1D
,
paramVal
,
sampList
from
rrompy.utilities.base
import
verbosityManager
as
vbMng
from
rrompy.sampling
import
sampleList
,
emptySampleList
__all__
=
[
'SamplingEnginePivotedPOD'
]
class
SamplingEnginePivotedPOD
(
SamplingEnginePivoted
):
"""HERE"""
def
resetHistory
(
self
,
j
:
int
=
1
):
super
()
.
resetHistory
(
j
)
self
.
samples_full
=
[
None
]
*
j
self
.
RPOD
=
[
None
]
*
j
def
popSample
(
self
,
j
:
int
):
if
hasattr
(
self
,
"nsamples"
)
and
self
.
nsamples
[
j
]
>
1
:
self
.
RPOD
[
j
]
=
self
.
RPOD
[
j
][:
-
1
,
:
-
1
]
self
.
samples_full
[
j
]
.
pop
()
super
()
.
popSample
(
j
)
def
coalesceSamples
(
self
,
tol
:
float
=
1e-12
):
super
()
.
coalesceSamples
()
self
.
samplesCoalesced
,
RPODC
=
(
self
.
PODEngine
.
generalizedQR
(
self
.
samplesCoalesced
))
self
.
RPODCoalesced
=
np
.
zeros
((
self
.
samplesCoalesced
.
shape
[
1
],
self
.
samplesCoalesced
.
shape
[
1
]),
dtype
=
self
.
RPOD
[
0
]
.
dtype
)
self
.
samples_fullCoalesced
=
emptySampleList
()
self
.
samples_fullCoalesced
.
reset
((
self
.
samples_full
[
0
]
.
shape
[
0
],
self
.
samplesCoalesced
.
shape
[
1
]),
self
.
samples_full
[
0
]
.
dtype
)
ci
=
0
for
j
,
(
Rloc
,
samp
)
in
enumerate
(
zip
(
self
.
RPOD
,
self
.
samples_full
)):
ri
=
0
Rheg
=
Rloc
.
shape
[
1
]
for
k
,
Rloc2
in
enumerate
(
self
.
RPOD
[:
j
+
1
]):
Rlen
=
Rloc2
.
shape
[
1
]
self
.
RPODCoalesced
[
ri
:
ri
+
Rlen
,
ci
:
ci
+
Rheg
]
=
(
RPODC
[
ri
:
ri
+
Rlen
,
ci
:
ci
+
Rheg
]
.
dot
(
Rloc
))
ri
+=
Rlen
self
.
samples_fullCoalesced
.
data
[:,
ci
:
ci
+
Rheg
]
=
samp
.
data
ci
+=
Rheg
RCdiag
=
np
.
abs
(
np
.
diag
(
self
.
RPODCoalesced
))
RCdiag
/=
RCdiag
[
0
]
ntrunc
=
np
.
nonzero
(
RCdiag
<
tol
)[
0
]
if
len
(
ntrunc
)
==
0
:
return
self
.
samplesCoalesced
.
data
=
self
.
samplesCoalesced
.
data
[:,
:
ntrunc
[
0
]]
self
.
RPODCoalesced
=
self
.
RPODCoalesced
[:
ntrunc
[
0
],
:]
@property
def
HFEngine
(
self
):
"""Value of HFEngine. Its assignment resets history."""
return
self
.
_HFEngine
@HFEngine.setter
def
HFEngine
(
self
,
HFEngine
):
self
.
_HFEngine
=
HFEngine
self
.
resetHistory
()
self
.
PODEngine
=
PODEngine
(
self
.
_HFEngine
)
def
preprocesssamples
(
self
,
idxs
:
Np1D
,
j
:
int
)
->
sampList
:
if
self
.
samples_full
[
j
]
is
None
or
len
(
self
.
samples_full
[
j
])
==
0
:
return
return
self
.
samples_full
[
j
](
idxs
)
def
postprocessu
(
self
,
u
:
sampList
,
j
:
int
,
overwrite
:
bool
=
False
)
->
Np1D
:
ns
=
self
.
nsamples
[
j
]
if
overwrite
:
self
.
samples_full
[
j
][
ns
]
=
copy
(
u
)
else
:
if
ns
==
0
:
self
.
samples_full
[
j
]
=
sampleList
(
u
)
else
:
self
.
samples_full
[
j
]
.
append
(
u
)
return
u
def
postprocessuBulk
(
self
,
u
:
sampList
,
j
:
int
)
->
sampList
:
self
.
samples_full
[
j
]
=
copy
(
u
)
vbMng
(
self
,
"INIT"
,
"Starting orthogonalization for marginal {}."
.
format
(
j
),
40
)
u
,
self
.
RPOD
[
j
]
=
self
.
PODEngine
.
generalizedQR
(
self
.
samples_full
[
j
])
vbMng
(
self
,
"DEL"
,
"Done orthogonalizing."
,
40
)
return
u
def
lastSampleManagement
(
self
,
j
:
int
):
self
.
samples
[
j
]
=
self
.
postprocessuBulk
(
self
.
samples_full
[
j
],
j
)
def
preallocateSamples
(
self
,
u
:
Np1D
,
mu
:
paramVal
,
n
:
int
,
j
:
int
):
super
()
.
preallocateSamples
(
u
,
mu
,
n
,
j
)
self
.
samples_full
[
j
]
.
reset
((
u
.
shape
[
0
],
n
),
u
.
dtype
)
self
.
samples_full
[
j
][
0
]
=
u
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