Diffusion RationalROMPy (master) History

RROMPy/rrompy
master068522db0163cc9084b40f6…

Sep 25 2020

Hotfix for removed parameter in pivoted approximants.
068522db0163
·pradovera on Sep 25 2020, 16:52.
Improved folder structure and code commenting.
5c2ab7641888
·pradovera on Sep 25 2020, 16:49.

Aug 27 2020

Added hybrid POD option for column normalization and related sampling engine.
2924ba713efc
·pradovera on Aug 27 2020, 16:19.

Aug 21 2020

Added 2-way sparse grid refinement.
f1d7f17aaa9b
·pradovera on Aug 21 2020, 17:26.

Aug 18 2020

Fixed bug with preemptive end of greedy loop in pivoted approximation. Made…
490f86110f73
·pradovera on Aug 18 2020, 17:09.

Aug 17 2020

Made match pivoted greedy rely on hat functions within outer loop. Removed…
f168c4c11054
·pradovera on Aug 17 2020, 17:12.

Aug 5 2020

Added absolute cutOff tolerances for poles. Added proxys for mu0 and…
8ec0029bfa45
·pradovera on Aug 5 2020, 10:43.

Jul 30 2020

Turned residueTol and cutOffTolerances into properties of HFEngine in…
3daebf5d46ea
·pradovera on Jul 30 2020, 16:52.
Improved piecewise linear interpolation using triangular structure of…
18c23959ac9b
·pradovera on Jul 30 2020, 10:46.

Jul 29 2020

Minor improvements in sparse grid interpolation.
75fabaa452e9
·pradovera on Jul 29 2020, 17:15.

Jul 28 2020

Added computation of rational denominator based on barycentric coordinates.
43bdbb69d4ed
·pradovera on Jul 28 2020, 12:29.

Jul 24 2020

Fixed pivoted methods accounting for polynomials in nodal form. Added Loewner…
a87d7b9eb3c6
·pradovera on Jul 24 2020, 16:27.

Jul 23 2020

Added support for storage of polynomials in nodal form. Added options for…
9ac5820092a7
·pradovera on Jul 23 2020, 17:00.

Jul 8 2020

Minor bugfix.
3843ba26329c
·pradovera on Jul 8 2020, 19:44.
Fixed piecewise linear pivoted reconstruction. Added missing error print at end…
d9caf6a1c47e
·pradovera on Jul 8 2020, 10:36.

Jun 18 2020

Made cutOffTolerance property of standard rational interpolation. Replaced…
882206ec77ce
·pradovera on Jun 18 2020, 18:13.
Fixed management of bad poles in matched pivoted approximant.
9543fb07f7bc
·pradovera on Jun 18 2020, 15:11.

Jun 14 2020

Removed extra model computation in greedy finalization.
794ed66db39a
·pradovera on Jun 14 2020, 08:34.

Jun 12 2020

Fixed issues with model reconstruction and exception downgrading when greedy…
d7ba4667be43
·pradovera on Jun 12 2020, 14:30.

Jun 9 2020

Added refinement option for random samplers. Random samplers are now compatible…
3de0ecea977b
·pradovera on Jun 9 2020, 11:37.
Fixed MPI warning in tests. Minor changes in pseudo-random generators.
91789703024d
·pradovera on Jun 9 2020, 10:41.
Fixed inconsistent typing of radialWeights. Added test of cut-off in pivoting.
a94b50795e6a
·pradovera on Jun 9 2020, 08:40.

May 8 2020

Fixed bug in management of almost collinearity for Gram-Schmidt. Minor bug…
1d8177e9061b
·pradovera on May 8 2020, 12:29.

May 7 2020

Cleaned up access to data of parameterList and sampleList in approximants.
dc4c126441d8
·pradovera on May 7 2020, 17:34.
Improved data extraction from parameterList and sampleList.
274e2ca8da6f
·pradovera on May 7 2020, 16:39.

May 6 2020

Fixed bug in Householder-QR. Improved mass-chain example.
d0d233649759
·pradovera on May 6 2020, 10:01.

May 1 2020

Added decorator for white noise perturbation. Minor changes in verbosity…
758adb540761
·pradovera on May 1 2020, 15:56.
Added augmentation support for Helmholtz-like engines.
ca311622e744
·pradovera on May 1 2020, 15:55.

Apr 28 2020

Removed unnecessary imports and assignments.
c22922b0f948
·pradovera on Apr 28 2020, 15:20.
Added input by force in oscillator engine. Minor bug fixes. Minor improvements…
499b419a2e01
·pradovera on Apr 28 2020, 15:19.

Apr 27 2020

Added option for adaptive selection of radial scaling for radial basis…
d0bb5a548e8f
·pradovera on Apr 27 2020, 17:01.
Removed polyvanderTotal. Its function is now given within polyvander. Added…
832b76db9ab8
·pradovera on Apr 27 2020, 10:14.

Apr 24 2020

Improved marginal interpolant construction. Now piecewise linear approach does…
d95210f42d10
·pradovera on Apr 24 2020, 13:53.
Minor stability improvements in polynomial evaluation. Minor documentation…
25a6ff130b13
·pradovera on Apr 24 2020, 13:48.

Apr 23 2020

Improved radial basis support with threshold decorator. Removed thin plate…
a03104d4d605
·pradovera on Apr 23 2020, 13:34.

Apr 20 2020

Made angle computation in point matching based on chordal metric. Fixed…
7d0e009ae55c
·pradovera on Apr 20 2020, 13:12.
Added class checkParameterList function to approximants.
9fb11fdd91d1
·pradovera on Apr 20 2020, 10:26.
Simplified usage of checkParameterList. Updated tests accordingly.
4c06d65b32df
·pradovera on Apr 20 2020, 10:25.

Apr 17 2020

Minor bug fixes and changes following merge.
dea2860d5171
·pradovera on Apr 17 2020, 10:27.
Merging branch for advanced parameter mapping into develop branch.
d83d9b88d6a5
·pradovera on Apr 17 2020, 09:50.
Fixed location of scale factor computation.
a94cb24b08f9
·pradovera on Apr 17 2020, 09:06.
Forced expression not to be parameterList.
31f7ef3dc382
·pradovera on Apr 17 2020, 08:47.

Apr 16 2020

Enforced local parameterMap in HFEngines and approximants.
31584cb74aaa
·pradovera on Apr 16 2020, 17:20.
Moving from global to local (component-wise) parameterMap. Applied changes to…
f88d48963364
·pradovera on Apr 16 2020, 17:19.
Updated approximants and heaviside routines with parameterMap.
a2be943332da
·pradovera on Apr 16 2020, 15:07.
Changed rescalingExp into parameterMap in HFEngines. Updated examples and tests.
b72fd860b5d1
·pradovera on Apr 16 2020, 14:59.
Added parameterMap generator. Replaced scalingExp with parameterMap in…
039a74fd2bc1
·pradovera on Apr 16 2020, 14:48.

Apr 15 2020

Reorganized hfengines. Added eigenproblem and mass oscillator scipy-based…
26afad9e1c11
·pradovera on Apr 15 2020, 17:06.
Added removal of samples stored by pivoted approximant. Forced poles to be…
269482a7cc40
·pradovera on Apr 15 2020, 15:15.

Apr 2 2020

Removed unstable parallel communications exchanging lists. Added custom routine…
0fc09dbfb5c0
·pradovera on Apr 2 2020, 12:25.
Added proxys for basic send-recv parallel communications.
83f80600959d
·pradovera on Apr 2 2020, 12:23.

Apr 1 2020

Added empty parameter sampler to simplify initialization of NN approximants.
d70b108a7710
·pradovera on Apr 1 2020, 17:04.
Merging branch for snapshot storage into develop branch.
4dd4e40c3c9e
·pradovera on Apr 1 2020, 16:34.
Improved NN approximant with support-value structure for compatibility with…
26b5e900c13d
·pradovera on Apr 1 2020, 16:30.
Bug fixes. Added sample load from list of filenames. Pivoted approximants can…
a415fe2091d0
·pradovera on Apr 1 2020, 16:15.
Fixed naming issue in HDF5 file creation for fenics mesh serialization.
900b7652ad20
·pradovera on Apr 1 2020, 11:33.
Added support for snapshot storage from approximants. Storage for pivoted…
115d485aaa9c
·pradovera on Apr 1 2020, 11:25.
Changed sampling engines so that samples always contains non-orthogonalized…
b3fb8983f0fd
·pradovera on Apr 1 2020, 10:09.

Mar 31 2020

Forced approximants to have no sample memory. Fixed broken imports of sampling…
99c9db10ec8f
·pradovera on Mar 31 2020, 16:32.
Erased pivoted sampling engines. Added storage functionality for sampling…
d0fa1960b013
·pradovera on Mar 31 2020, 16:31.
Improved parallelism in approximants by using v-communications if possible.
a35824b905df
·pradovera on Mar 31 2020, 14:58.
Improved parallelism efficiency with v-communications. Removed option to…
22f2e4dda93d
·pradovera on Mar 31 2020, 14:56.
Minor bug fixes.
5be0ac5adcd1
·pradovera on Mar 31 2020, 08:42.

Mar 30 2020

Externalized rational function matching. Added shift-based matching strategy.
32d44644b439
·pradovera on Mar 30 2020, 15:45.

Mar 28 2020

Minor simplifications of matrix gather.
07d7aa821e90
·pradovera on Mar 28 2020, 14:01.
Parallelized greedy error estimators. Parallelized evaluation of pivoted…
f3c1b14ab42d
·pradovera on Mar 28 2020, 12:16.
Added support for serialization of parallel fenics function spaces.
6f99958a40f1
·pradovera on Mar 28 2020, 09:55.

Mar 27 2020

Fixed issue with collapse of mus in pivoted approximant. Fixed issue with…
3eb5515a2503
·pradovera on Mar 27 2020, 08:27.

Mar 26 2020

Added parallel support for pivoted greedy approximant.
286b57f61fb9
·pradovera on Mar 26 2020, 18:20.
Added parallel support for pivoted trained model. Added flag for forced…
e1838474bb35
·pradovera on Mar 26 2020, 18:18.
Removed local serial flags.
3ea2698ef82f
·pradovera on Mar 26 2020, 16:31.
Simplified serial bottlenecks and fixed verbosity manager by introducing global…
213b894bfff2
·pradovera on Mar 26 2020, 16:25.
Added parallel support for non-greedy pivoted approximants.
a8ae40aa40d6
·pradovera on Mar 26 2020, 13:41.
Removed tensorized sampling from pivoted sampling engine. Added functionalities…
baae524b1b1a
·pradovera on Mar 26 2020, 13:38.
Added parallel tools. Improved parallel verbosity manager. Still not managing…
afb40c1efcb8
·pradovera on Mar 26 2020, 13:34.

Mar 25 2020

Added basic parallel support for output of generic approximant. Added parallel…
fc30c872851d
·pradovera on Mar 25 2020, 16:34.
Parallelized plotting and Paraview output of engines. Improved parallelization…
2a9507b519ce
·pradovera on Mar 25 2020, 16:32.
Created submodule for parallelism tools. Updated verbosity manager master core…
5c75572e6108
·pradovera on Mar 25 2020, 16:30.
Added general parallelism tools. Added parallel option to residual computation.
ff049bc4bda7
·pradovera on Mar 25 2020, 12:23.
Added basic parallel functionalities to engine solve. Added partitioning tools.
6abf5f2c7e97
·pradovera on Mar 25 2020, 11:14.
Added sparse grid option for not reaching domain boundary.
4a9dfb5f74bc
·pradovera on Mar 25 2020, 09:27.

Mar 24 2020

Added option to not store old samples in marginal approximants, using standard…
cfa985447945
·pradovera on Mar 24 2020, 16:44.
Removed unused imports.
578bf9742242
·pradovera on Mar 24 2020, 16:44.
Added conversion to list of vector-like approxParameters to fix comparison…
49a3c8f49409
·pradovera on Mar 24 2020, 11:35.
Streamlined setup of trainedModel. Avoided repeated computation of old projMat…
64fa54b98e39
·pradovera on Mar 24 2020, 11:21.

Mar 23 2020

Reweighted residue angle in distance table.
92dbfefca381
·pradovera on Mar 23 2020, 17:09.
Fixed marginal coefficient support for collapsed models.
2ae1200a8cca
·pradovera on Mar 23 2020, 15:47.
Enforced marginal coefficient support through sparse matrices. Reduced Psupp to…
550abe7c7c01
·pradovera on Mar 23 2020, 11:54.

Mar 22 2020

Added missing index in virtual padding.
49bc23f1ea73
·pradovera on Mar 22 2020, 16:03.
Fixed residue transposition.
efaeee0cab63
·pradovera on Mar 22 2020, 15:34.
Introduced virtual padding to improve memory usage.
90813319950d
·pradovera on Mar 22 2020, 15:26.
Reduced space wasted by coalescing samples in marginal sampling engines.
30f9d658b5c3
·pradovera on Mar 22 2020, 13:22.

Mar 21 2020

Collapsed marginal interpolator in matched pivoted trained model. Now corrected…
5a0472c3b09a
·pradovera on Mar 21 2020, 10:31.

Mar 20 2020

Added assignment of musMarginal on model load. Turned musMarginal into…
003625e6612a
·pradovera on Mar 20 2020, 11:14.

Mar 19 2020

Fixed evaluation of hat function for non-uniform grids. Renamed lobatto to…
e39156671f06
·pradovera on Mar 19 2020, 11:53.
Fixed sample batch bug in rational greedy.
8195fa637a24
·pradovera on Mar 19 2020, 11:21.
Added check for recompression in trainedModels.
473adff6dbac
·pradovera on Mar 19 2020, 10:30.
Fixed wrong coeff size in interpolators. Added length check in interpolator…
f6fabed45f64
·pradovera on Mar 19 2020, 10:25.

Mar 18 2020

Fixed wrong depth selection bug in piecewise linear marginalization. Improved…
382e1369cfbb
·pradovera on Mar 18 2020, 18:23.
Added piecewise linear interpolant in marginal approximants.
08265a1d5bb5
·pradovera on Mar 18 2020, 17:02.