version: "3"
services:

  # Proxy facade for all services
  proxy:
    build: ./desuto-proxy
    depends_on:
      - mysql
      - couchdb
      - uploads
      - images
      - paradise-gf
      - retrieval
      - webviewer
      - iipsrv
      - slideprops
    ports:
      - 80:80

  # MySQL server for storing image information (URLs, modalities, etc.)
  mysql:
    image: mariadb
    restart: always
    environment:
      MYSQL_ROOT_PASSWORD: $$MARIA-15-mysql!
      MYSQL_DATABASE: paradise
      MYSQL_USER: paradise
      MYSQL_PASSWORD: $$PWDforParaD1SE!
    volumes:
      - ./data/all-dmli-pubmed-info.sql:/docker-entrypoint-initdb.d/dump.sql
    expose:
      - 3306

  # CouchDB server for storing image annotation data
  couchdb:
    build: ./desuto-couchdb
    restart: always
    expose:
      - 5984

  # nginx server for serving images that are uploaded to the retrieval interface
  uploads:
    image: nginx:alpine
    restart: always
    volumes:
      - upload-volume:/usr/share/nginx/html/uploads/:ro
    expose:
      - 80

  # nginx server for serving images (patches) contained in the visual indices
  images:
    image: nginx:alpine
    restart: always
    volumes:
      - ./data/images/:/usr/share/nginx/html/images/:ro
    expose:
      - 80

  # GlassFish application server hosting the ParaDISE engine and WebServices
  paradise-gf:
    build: ./paradise-gf
    volumes:
      - upload-volume:/uploads/
      - ./data/paradise-files/:/data/paradise
    environment:
      - ADMIN_PASSWORD=$$pWd4glassF1SH!
    expose:
      - 8080
      - 4848

  # Apache server for the retrieval interface
  retrieval:
    build:
      context: ./desuto-retrieval
      args:
        - PARADISE_ROOT_URL=${PARADISE_ROOT_URL}
        - IIP_ROOT_URL=${IIP_ROOT_URL}
        - VIEWER_ROOT_URL=${VIEWER_ROOT_URL}
        - SLIDEPROPS_ROOT_URL=${SLIDEPROPS_ROOT_URL}
    restart: always
    volumes:
        - ${SLIDEVIEWERDATA_LOCAL_PATH}:/slideviewerdata
    expose:
      - 80

  # Node.js server for the Web viewer and annotation tool
  webviewer:
    build:
      context: ./desuto-viewer
      args:
        - RETRIEVAL_INTERFACE_ROOT_URL=${RETRIEVAL_INTERFACE_ROOT_URL}
        - PARADISE_ROOT_URL=${PARADISE_ROOT_URL}
        - IIP_ROOT_URL=${IIP_ROOT_URL}
        - SLIDEPROPS_ROOT_URL=${SLIDEPROPS_ROOT_URL}
        - COUCHDB_FRONTEND_ROOT_URL=${COUCHDB_FRONTEND_ROOT_URL}
        - COUCHDB_BACKEND_ROOT_URL=${COUCHDB_BACKEND_ROOT_URL}
    volumes:
        - ${SLIDEVIEWERDATA_LOCAL_PATH}:/slideviewerdata
    expose:
      - 3000

  # IIPImage server for generating the image patches
  iipsrv:
    build: ./desuto-iipsrv
    volumes:
        - ${SLIDEVIEWERDATA_LOCAL_PATH}:/slideviewerdata

  # Python server for getting slide properties using openslide
  slideprops:
    build: ./desuto-slideproperties
    volumes:
        - ${SLIDEVIEWERDATA_LOCAL_PATH}:/slideviewerdata

# Shared volume for uploaded images
volumes:
  upload-volume: