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<h2 title="Class DBconnector_mu" class="title">Class DBconnector_mu</h2>
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<li>java.lang.Object</li>
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<li>FrameWork.DBconnector_mu</li>
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<pre>public class <span class="strong">DBconnector_mu</span>
extends java.lang.Object</pre>
<div class="block">The Class DBconnector_mu.</div>
<dl><dt><span class="strong">Author:</span></dt>
<dd>Kevin Serrano, J駻emy Weber, raisaro</dd></dl>
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<th class="colFirst" scope="col">Modifier and Type</th>
<th class="colLast" scope="col">Field and Description</th>
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<td class="colFirst"><code>private static java.sql.Connection</code></td>
<td class="colLast"><code><strong><a href="../FrameWork/DBconnector_mu.html#connect">connect</a></strong></code>
<div class="block">The connect.</div>
</td>
</tr>
<tr class="rowColor">
<td class="colFirst"><code>private static java.sql.PreparedStatement</code></td>
<td class="colLast"><code><strong><a href="../FrameWork/DBconnector_mu.html#preparedStatement">preparedStatement</a></strong></code>
<div class="block">The prepared statement.</div>
</td>
</tr>
<tr class="altColor">
<td class="colFirst"><code>private static <a href="../FrameWork/ReadProperties.html" title="class in FrameWork">ReadProperties</a></code></td>
<td class="colLast"><code><strong><a href="../FrameWork/DBconnector_mu.html#prop">prop</a></strong></code>
<div class="block">The prop.</div>
</td>
</tr>
<tr class="rowColor">
<td class="colFirst"><code>private static java.sql.ResultSet</code></td>
<td class="colLast"><code><strong><a href="../FrameWork/DBconnector_mu.html#resultSet">resultSet</a></strong></code>
<div class="block">The result set.</div>
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<td class="colOne"><code><strong><a href="../FrameWork/DBconnector_mu.html#DBconnector_mu()">DBconnector_mu</a></strong>()</code>
<div class="block">Instantiates a new d bconnector_mu.</div>
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<td class="colFirst"><code>private static void</code></td>
<td class="colLast"><code><strong><a href="../FrameWork/DBconnector_mu.html#closeConnection()">closeConnection</a></strong>()</code>
<div class="block">This method close the connection to any database.</div>
</td>
</tr>
<tr class="rowColor">
<td class="colFirst"><code>static java.util.ArrayList[]</code></td>
<td class="colLast"><code><strong><a href="../FrameWork/DBconnector_mu.html#getCFs(int)">getCFs</a></strong>(int&nbsp;ID_t)</code>
<div class="block">Gets the c fs.</div>
</td>
</tr>
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<td class="colFirst"><code>static java.util.ArrayList[]</code></td>
<td class="colLast"><code><strong><a href="../FrameWork/DBconnector_mu.html#getMarkers(int)">getMarkers</a></strong>(int&nbsp;ID_t)</code>
<div class="block">Gets the markers.</div>
</td>
</tr>
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<td class="colFirst"><code>static int</code></td>
<td class="colLast"><code><strong><a href="../FrameWork/DBconnector_mu.html#getNbDiseases()">getNbDiseases</a></strong>()</code>
<div class="block">Gets the nb diseases.</div>
</td>
</tr>
<tr class="altColor">
<td class="colFirst"><code>static java.util.ArrayList&lt;java.lang.Integer&gt;</code></td>
<td class="colLast"><code><strong><a href="../FrameWork/DBconnector_mu.html#getPatients()">getPatients</a></strong>()</code>
<div class="block">Gets the patients.</div>
</td>
</tr>
<tr class="rowColor">
<td class="colFirst"><code>static java.util.ArrayList&lt;java.lang.String&gt;</code></td>
<td class="colLast"><code><strong><a href="../FrameWork/DBconnector_mu.html#getPatientsName(java.lang.String)">getPatientsName</a></strong>(java.lang.String&nbsp;letter)</code>
<div class="block">Gets the patients name.</div>
</td>
</tr>
<tr class="altColor">
<td class="colFirst"><code>static java.math.BigInteger</code></td>
<td class="colLast"><code><strong><a href="../FrameWork/DBconnector_mu.html#getPrivateKey(int)">getPrivateKey</a></strong>(int&nbsp;ID_p)</code>
<div class="block">Gets the private key.</div>
</td>
</tr>
<tr class="rowColor">
<td class="colFirst"><code>static org.json.JSONObject</code></td>
<td class="colLast"><code><strong><a href="../FrameWork/DBconnector_mu.html#getProfil(int)">getProfil</a></strong>(int&nbsp;id)</code>
<div class="block">Gets the profil.</div>
</td>
</tr>
<tr class="altColor">
<td class="colFirst"><code>static java.math.BigInteger[]</code></td>
<td class="colLast"><code><strong><a href="../FrameWork/DBconnector_mu.html#getPublicKey(int)">getPublicKey</a></strong>(int&nbsp;ID_p)</code>
<div class="block">Gets the public key.</div>
</td>
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<tr class="rowColor">
<td class="colFirst"><code>static double[]</code></td>
<td class="colLast"><code><strong><a href="../FrameWork/DBconnector_mu.html#getQuartiles(int)">getQuartiles</a></strong>(int&nbsp;id_d)</code>
<div class="block">Gets the quartiles.</div>
</td>
</tr>
<tr class="altColor">
<td class="colFirst"><code>static java.util.ArrayList[]</code></td>
<td class="colLast"><code><strong><a href="../FrameWork/DBconnector_mu.html#getStats(int)">getStats</a></strong>(int&nbsp;id_d)</code>&nbsp;</td>
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<td class="colFirst"><code>static int</code></td>
<td class="colLast"><code><strong><a href="../FrameWork/DBconnector_mu.html#getTestID(java.lang.String)">getTestID</a></strong>(java.lang.String&nbsp;desc)</code>
<div class="block">Gets the test id.</div>
</td>
</tr>
<tr class="altColor">
<td class="colFirst"><code>static java.util.ArrayList&lt;java.lang.Integer&gt;</code></td>
<td class="colLast"><code><strong><a href="../FrameWork/DBconnector_mu.html#getTests()">getTests</a></strong>()</code>&nbsp;</td>
</tr>
<tr class="rowColor">
<td class="colFirst"><code>static void</code></td>
<td class="colLast"><code><strong><a href="../FrameWork/DBconnector_mu.html#insertKey(int, java.lang.String, boolean)">insertKey</a></strong>(int&nbsp;id_p,
java.lang.String&nbsp;key,
boolean&nbsp;flag)</code>
<div class="block">Insert key.</div>
</td>
</tr>
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<td class="colFirst"><code>static void</code></td>
<td class="colLast"><code><strong><a href="../FrameWork/DBconnector_mu.html#insertNewPatient(java.lang.String, java.lang.String, java.sql.Date, int)">insertNewPatient</a></strong>(java.lang.String&nbsp;lastName,
java.lang.String&nbsp;name,
java.sql.Date&nbsp;birthDate,
int&nbsp;id)</code>
<div class="block">Insert new patient.</div>
</td>
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<tr class="rowColor">
<td class="colFirst"><code>private static void</code></td>
<td class="colLast"><code><strong><a href="../FrameWork/DBconnector_mu.html#openConnection()">openConnection</a></strong>()</code>
<div class="block">This method set up the connection to the PharmacoGenomics database.</div>
</td>
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<td class="colFirst"><code>static javax.swing.tree.DefaultMutableTreeNode</code></td>
<td class="colLast"><code><strong><a href="../FrameWork/DBconnector_mu.html#processHierarchy(java.lang.Object[])">processHierarchy</a></strong>(java.lang.Object[]&nbsp;hierarchy)</code>
<div class="block">Process hierarchy.</div>
</td>
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<td class="colFirst"><code>static void</code></td>
<td class="colLast"><code><strong><a href="../FrameWork/DBconnector_mu.html#putResult(int, int, double)">putResult</a></strong>(int&nbsp;id_p,
int&nbsp;id_t,
double&nbsp;result)</code>&nbsp;</td>
</tr>
<tr class="altColor">
<td class="colFirst"><code>static javax.swing.JTree</code></td>
<td class="colLast"><code><strong><a href="../FrameWork/DBconnector_mu.html#readTree()">readTree</a></strong>()</code>
<div class="block">Read tree.</div>
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<h3>Methods inherited from class&nbsp;java.lang.Object</h3>
<code>clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait</code></li>
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<h4>connect</h4>
<pre>private static&nbsp;java.sql.Connection connect</pre>
<div class="block">The connect.</div>
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<pre>private static&nbsp;java.sql.PreparedStatement preparedStatement</pre>
<div class="block">The prepared statement.</div>
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<pre>private static&nbsp;java.sql.ResultSet resultSet</pre>
<div class="block">The result set.</div>
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<pre>private static&nbsp;<a href="../FrameWork/ReadProperties.html" title="class in FrameWork">ReadProperties</a> prop</pre>
<div class="block">The prop.</div>
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<h4>DBconnector_mu</h4>
<pre>public&nbsp;DBconnector_mu()</pre>
<div class="block">Instantiates a new d bconnector_mu.</div>
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<h4>getPatients</h4>
<pre>public static&nbsp;java.util.ArrayList&lt;java.lang.Integer&gt;&nbsp;getPatients()
throws java.sql.SQLException</pre>
<div class="block">Gets the patients.</div>
<dl><dt><span class="strong">Returns:</span></dt><dd>the patients</dd>
<dt><span class="strong">Throws:</span></dt>
<dd><code>java.sql.SQLException</code> - the sQL exception</dd></dl>
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<h4>getNbDiseases</h4>
<pre>public static&nbsp;int&nbsp;getNbDiseases()
throws java.sql.SQLException</pre>
<div class="block">Gets the nb diseases.</div>
<dl><dt><span class="strong">Returns:</span></dt><dd>the nb diseases</dd>
<dt><span class="strong">Throws:</span></dt>
<dd><code>java.sql.SQLException</code> - the sQL exception</dd></dl>
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<pre>public static&nbsp;int&nbsp;getTestID(java.lang.String&nbsp;desc)
throws java.sql.SQLException</pre>
<div class="block">Gets the test id.</div>
<dl><dt><span class="strong">Parameters:</span></dt><dd><code>desc</code> - the desc</dd>
<dt><span class="strong">Returns:</span></dt><dd>the test id</dd>
<dt><span class="strong">Throws:</span></dt>
<dd><code>java.sql.SQLException</code> - the sQL exception</dd></dl>
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<pre>public static&nbsp;java.util.ArrayList[]&nbsp;getMarkers(int&nbsp;ID_t)
throws java.sql.SQLException</pre>
<div class="block">Gets the markers.</div>
<dl><dt><span class="strong">Parameters:</span></dt><dd><code>ID_t</code> - the i d_t</dd>
<dt><span class="strong">Returns:</span></dt><dd>the markers</dd>
<dt><span class="strong">Throws:</span></dt>
<dd><code>java.sql.SQLException</code> - the sQL exception</dd></dl>
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<pre>public static&nbsp;java.util.ArrayList[]&nbsp;getCFs(int&nbsp;ID_t)
throws java.sql.SQLException</pre>
<div class="block">Gets the c fs.</div>
<dl><dt><span class="strong">Parameters:</span></dt><dd><code>ID_t</code> - the i d_t</dd>
<dt><span class="strong">Returns:</span></dt><dd>the c fs</dd>
<dt><span class="strong">Throws:</span></dt>
<dd><code>java.sql.SQLException</code> - the sQL exception</dd></dl>
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<pre>public static&nbsp;java.math.BigInteger[]&nbsp;getPublicKey(int&nbsp;ID_p)
throws java.sql.SQLException</pre>
<div class="block">Gets the public key.</div>
<dl><dt><span class="strong">Parameters:</span></dt><dd><code>ID_p</code> - the i d_p</dd>
<dt><span class="strong">Returns:</span></dt><dd>the public key</dd>
<dt><span class="strong">Throws:</span></dt>
<dd><code>java.sql.SQLException</code> - the sQL exception</dd></dl>
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<pre>public static&nbsp;java.math.BigInteger&nbsp;getPrivateKey(int&nbsp;ID_p)
throws java.sql.SQLException</pre>
<div class="block">Gets the private key.</div>
<dl><dt><span class="strong">Parameters:</span></dt><dd><code>ID_p</code> - the i d_p</dd>
<dt><span class="strong">Returns:</span></dt><dd>the private key</dd>
<dt><span class="strong">Throws:</span></dt>
<dd><code>java.sql.SQLException</code> - the sQL exception</dd></dl>
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<h4>getProfil</h4>
<pre>public static&nbsp;org.json.JSONObject&nbsp;getProfil(int&nbsp;id)</pre>
<div class="block">Gets the profil.</div>
<dl><dt><span class="strong">Parameters:</span></dt><dd><code>id</code> - the id</dd>
<dt><span class="strong">Returns:</span></dt><dd>the profil</dd></dl>
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<h4>getPatientsName</h4>
<pre>public static&nbsp;java.util.ArrayList&lt;java.lang.String&gt;&nbsp;getPatientsName(java.lang.String&nbsp;letter)</pre>
<div class="block">Gets the patients name.</div>
<dl><dt><span class="strong">Parameters:</span></dt><dd><code>letter</code> - the letter</dd>
<dt><span class="strong">Returns:</span></dt><dd>the patients name</dd></dl>
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<h4>insertKey</h4>
<pre>public static&nbsp;void&nbsp;insertKey(int&nbsp;id_p,
java.lang.String&nbsp;key,
boolean&nbsp;flag)
throws java.sql.SQLException</pre>
<div class="block">Insert key.</div>
<dl><dt><span class="strong">Parameters:</span></dt><dd><code>id_p</code> - the id_p</dd><dd><code>key</code> - the key</dd><dd><code>flag</code> - the flag</dd>
<dt><span class="strong">Throws:</span></dt>
<dd><code>java.sql.SQLException</code> - the sQL exception</dd></dl>
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<h4>insertNewPatient</h4>
<pre>public static&nbsp;void&nbsp;insertNewPatient(java.lang.String&nbsp;lastName,
java.lang.String&nbsp;name,
java.sql.Date&nbsp;birthDate,
int&nbsp;id)</pre>
<div class="block">Insert new patient.</div>
<dl><dt><span class="strong">Parameters:</span></dt><dd><code>lastName</code> - the last name</dd><dd><code>name</code> - the name</dd><dd><code>birthDate</code> - the birth date</dd><dd><code>id</code> - the id</dd></dl>
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<h4>openConnection</h4>
<pre>private static&nbsp;void&nbsp;openConnection()</pre>
<div class="block">This method set up the connection to the PharmacoGenomics database.</div>
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<h4>closeConnection</h4>
<pre>private static&nbsp;void&nbsp;closeConnection()</pre>
<div class="block">This method close the connection to any database.</div>
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<h4>readTree</h4>
<pre>public static&nbsp;javax.swing.JTree&nbsp;readTree()</pre>
<div class="block">Read tree.</div>
<dl><dt><span class="strong">Returns:</span></dt><dd>the j tree</dd></dl>
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<a name="processHierarchy(java.lang.Object[])">
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<h4>processHierarchy</h4>
<pre>public static&nbsp;javax.swing.tree.DefaultMutableTreeNode&nbsp;processHierarchy(java.lang.Object[]&nbsp;hierarchy)</pre>
<div class="block">Process hierarchy.</div>
<dl><dt><span class="strong">Parameters:</span></dt><dd><code>hierarchy</code> - the hierarchy</dd>
<dt><span class="strong">Returns:</span></dt><dd>the default mutable tree node</dd></dl>
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<h4>getQuartiles</h4>
<pre>public static&nbsp;double[]&nbsp;getQuartiles(int&nbsp;id_d)</pre>
<div class="block">Gets the quartiles.</div>
<dl><dt><span class="strong">Parameters:</span></dt><dd><code>id_d</code> - the id_d</dd>
<dt><span class="strong">Returns:</span></dt><dd>the quartiles</dd></dl>
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<h4>getTests</h4>
<pre>public static&nbsp;java.util.ArrayList&lt;java.lang.Integer&gt;&nbsp;getTests()
throws java.sql.SQLException</pre>
<dl><dt><span class="strong">Throws:</span></dt>
<dd><code>java.sql.SQLException</code></dd></dl>
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<h4>putResult</h4>
<pre>public static&nbsp;void&nbsp;putResult(int&nbsp;id_p,
int&nbsp;id_t,
double&nbsp;result)</pre>
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<h4>getStats</h4>
<pre>public static&nbsp;java.util.ArrayList[]&nbsp;getStats(int&nbsp;id_d)
throws java.sql.SQLException</pre>
<dl><dt><span class="strong">Throws:</span></dt>
<dd><code>java.sql.SQLException</code></dd></dl>
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