3-integrate_ODEs.py
57772ff3a7f5master

3-integrate_ODEs.py
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			from configparser import ConfigParser
			from kinetics.integrate_ODEs import integrate_ODEs

			# parse arguments from configfile
			configs = ConfigParser()
			configs.read('configfile.ini')

			met_model = configs['PATHS']['met_model']
			ss_idx = int(configs['EVOSTRAT']['ss_idx'])

			path_to_parameters = configs['ODE_INTEGRATION']['path_to_parameter_set']
			output_name = configs['ODE_INTEGRATION']['name_output']
			output_path = configs['ODE_INTEGRATION']['path_output']
			pc_perturb = float(configs['ODE_INTEGRATION']['pc_perturbed'])

			integrate_ODEs(path_to_parameters, met_model, ss_idx, pc_perturb, output_path, output_name)