profiler.m
39f029945fb6gather_output

profiler.m
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			%% load profiling
			filename = sprintf([BASIC.RESDIR,'outputs_%.2d.h5'],00);

			CPUTIME = h5readatt(filename,'/data/input','cpu_time');
			DT_SIM = h5readatt(filename,'/data/input','dt');


			rhs_Tc = h5read(filename,'/profiler/Tc_rhs');
			adv_field_Tc = h5read(filename,'/profiler/Tc_adv_field');
			poisson_Tc = h5read(filename,'/profiler/Tc_poisson');
			Sapj_Tc = h5read(filename,'/profiler/Tc_Sapj');
			diag_Tc = h5read(filename,'/profiler/Tc_diag');
			checkfield_Tc= h5read(filename,'/profiler/Tc_checkfield');
			step_Tc = h5read(filename,'/profiler/Tc_step');
			Ts0D = h5read(filename,'/profiler/time');

			missing_Tc = step_Tc - rhs_Tc - adv_field_Tc -...
			poisson_Tc - Sapj_Tc -diag_Tc -checkfield_Tc;
			total_Tc = step_Tc;
			%% Plots
			Y = [diff(rhs_Tc); diff(adv_field_Tc); diff(poisson_Tc);...
			diff(Sapj_Tc); diff(checkfield_Tc); diff(diag_Tc); diff(missing_Tc)];
			Y = reshape(Y,[numel(Y)/7,7]);
			fig = figure;

			p1 = area(Ts0D(2:end),100*Y./diff(total_Tc),'LineStyle','none');
			legend('Compute RHS','Adv. fields','Poisson','Sapj','Check+Sym','Diag','Missing')
			xlabel('Sim. Time'); ylabel('Step Comp. Time [\%]')
			ylim([0,100]); xlim([Ts0D(2),Ts0D(end)]);
			hold on
			yyaxis right
			p2 = plot(Ts0D(2:end),diff(total_Tc),'--r','LineWidth',1.0);
			ylabel('Step Comp. Time [s]')
			ylim([0,1.1*max(diff(total_Tc))])
			set(gca,'ycolor','r')
			FIGNAME = 'profiler';
			save_figure