iCAPs_v2/AddPaths.m
e5f5005bb2efmaster

AddPaths.m
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			%% This function adds all the useful paths to the matlab environment for
			% the application of total activation routines
			function [] = AddPaths()

			% Path towards the toolbox functions
			addpath(fullfile('functions','00_Utilities'));
			addpath(fullfile('functions','00_Preprocessing'));
			addpath(genpath(fullfile('functions','01_TotalActivation')));
			addpath(fullfile('functions','02_Thresholding'));
			addpath(fullfile('functions','03_Clustering'));
			addpath(fullfile('functions','04_Regression'));
			addpath(fullfile('functions'));
			% addpath(genpath(fullfile('functions')));

			addpath(fullfile('input_scripts'));


			% Path towards SPM12
			addpath(fullfile('packages','spm12'));

			% Path towards cbiNifti to read and write 4D nifti data
			addpath(fullfile('packages','cbiNifti'));

			% Path towards munkres function for Hungarian algorithm
			addpath(fullfile('packages','munkres'));

			% Path towards function to find knee points
			addpath(fullfile('packages','knee_pt'));

			% Path towards function to findgsp toolbox
			addpath(genpath(fullfile('packages','gspbox')));

			end