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lammps/examples/body/log.15May15.body.g++.4
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LAMMPS (30 Apr 2015)
# 2d polygon nparticle bodies
units lj
dimension 2
atom_style body nparticle 2 6
read_data data.body
orthogonal box = (-15.5322 -15.5322 -0.5) to (15.5322 15.5322 0.5)
2 by 2 by 1 MPI processor grid
reading atoms ...
100 atoms
100 bodies
velocity all create 1.44 87287 loop geom
pair_style body 5.0
pair_coeff * * 1.0 1.0
neighbor 0.3 bin
fix 1 all nve/body
fix 2 all enforce2d
#compute 1 all body/local type 1 2 3
#dump 1 all local 100 dump.body index c_1[1] c_1[2] c_1[3] c_1[4]
thermo 500
run 10000
Neighbor list info ...
1 neighbor list requests
update every 1 steps, delay 10 steps, check yes
master list distance cutoff = 5.3
Memory usage per processor = 3.81447 Mbytes
Step Temp E_pair E_mol TotEng Press
0 1.44 -0.63799525 0 0.78760475 -0.15028724
500 1.5681124 -1.6060641 0 -0.053632801 0.23819933
1000 1.7596217 -1.7290976 0 0.012927885 0.12600944
1500 1.5746718 -1.5427933 0 0.016131767 0.21832856
2000 1.6187614 -1.5563097 0 0.046264104 0.35910742
2500 1.7210993 -1.6955088 0 0.0083794889 0.24522984
3000 1.7893309 -1.752166 0 0.019271611 0.1013425
3500 1.8922335 -1.7645965 0 0.10871463 0.51383163
4000 1.7068531 -1.6754593 0 0.014325271 0.31615632
4500 1.6924784 -1.7467381 0 -0.071184511 0.13138777
5000 1.7693873 -1.7177224 0 0.033971031 0.15253256
5500 1.6829564 -1.6729159 0 -0.0067890531 0.13745591
6000 1.9528594 -1.8229135 0 0.11041735 0.21444568
6500 1.8827185 -2.0037589 0 -0.13986752 0.044294616
7000 1.4723386 -1.6538512 0 -0.19623597 0.23973507
7500 1.7787216 -1.729955 0 0.030979334 0.15662931
8000 1.8821398 -1.8913154 0 -0.027996988 0.26972798
8500 1.7200393 -1.771927 0 -0.069088004 0.48600924
9000 1.6731944 -1.702556 0 -0.046093535 0.1259234
9500 1.7159449 -1.6430047 0 0.0557808 0.3620955
10000 1.4879693 -1.5303732 0 -0.057283589 0.34668456
Loop time of 0.868025 on 4 procs for 10000 steps with 100 atoms
Pair time (%) = 0.558682 (64.3624)
Neigh time (%) = 0.00442415 (0.509681)
Comm time (%) = 0.249459 (28.7387)
Outpt time (%) = 0.000335336 (0.038632)
Other time (%) = 0.0551249 (6.35061)
Nlocal: 25 ave 29 max 20 min
Histogram: 1 0 0 0 0 1 1 0 0 1
Nghost: 44 ave 45 max 43 min
Histogram: 1 0 0 0 0 2 0 0 0 1
Neighs: 104 ave 133 max 64 min
Histogram: 1 0 0 1 0 0 0 0 0 2
Total # of neighbors = 416
Ave neighs/atom = 4.16
Neighbor list builds = 773
Dangerous builds = 31
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