Homec4science
Diffusion lammps (efficient_neuronet) Browse

lammps/lib/gpu/lal_born_coul_wolf.cu
b56bdd2d7bf3efficient_neuronet

Last Change
Raw File

lal_born_coul_wolf.cu
View Options

// **************************************************************************
// born_coul_wolf.cu
// -------------------
// Trung Dac Nguyen (ORNL)
//
// Device code for acceleration of the born/coul/wolf pair style
//
// __________________________________________________________________________
// This file is part of the LAMMPS Accelerator Library (LAMMPS_AL)
// __________________________________________________________________________
//
// begin :
// email : nguyentd@ornl.gov
// ***************************************************************************/
#ifdef NV_KERNEL
#include "lal_aux_fun1.h"
#ifndef _DOUBLE_DOUBLE
texture<float4> pos_tex;
texture<float> q_tex;
#else
texture<int4,1> pos_tex;
texture<int2> q_tex;
#endif
#else
#define pos_tex x_
#define q_tex q_
#endif
#define MY_PIS (acctyp)1.77245385090551602729
__kernel void k_born_wolf(const __global numtyp4 *restrict x_,
const __global numtyp4 *restrict coeff1,
const __global numtyp4 *restrict coeff2,
const int lj_types,
const __global numtyp *restrict sp_lj_in,
const __global int *dev_nbor,
const __global int *dev_packed,
__global acctyp4 *restrict ans,
__global acctyp *restrict engv,
const int eflag, const int vflag, const int inum,
const int nbor_pitch,
const __global numtyp *restrict q_,
const __global numtyp4 *restrict cutsq_sigma,
const numtyp cut_coulsq, const numtyp qqrd2e,
const numtyp alf, const numtyp e_shift,
const numtyp f_shift, const int t_per_atom) {
int tid, ii, offset;
atom_info(t_per_atom,ii,tid,offset);
__local numtyp sp_lj[8];
sp_lj[0]=sp_lj_in[0];
sp_lj[1]=sp_lj_in[1];
sp_lj[2]=sp_lj_in[2];
sp_lj[3]=sp_lj_in[3];
sp_lj[4]=sp_lj_in[4];
sp_lj[5]=sp_lj_in[5];
sp_lj[6]=sp_lj_in[6];
sp_lj[7]=sp_lj_in[7];
acctyp energy=(acctyp)0;
acctyp e_coul=(acctyp)0;
acctyp4 f;
f.x=(acctyp)0; f.y=(acctyp)0; f.z=(acctyp)0;
acctyp virial[6];
for (int i=0; i<6; i++)
virial[i]=(acctyp)0;
if (ii<inum) {
int nbor, nbor_end;
int i, numj;
__local int n_stride;
nbor_info(dev_nbor,dev_packed,nbor_pitch,t_per_atom,ii,offset,i,numj,
n_stride,nbor_end,nbor);
numtyp4 ix; fetch4(ix,i,pos_tex); //x_[i];
numtyp qtmp; fetch(qtmp,i,q_tex);
int itype=ix.w;
if (eflag>0) {
acctyp e_self = -((acctyp)0.5*e_shift + alf/MY_PIS) *
qtmp*qtmp*qqrd2e/(acctyp)t_per_atom;
e_coul += (acctyp)2.0*e_self;
}
for ( ; nbor<nbor_end; nbor+=n_stride) {
int j=dev_packed[nbor];
numtyp factor_lj, factor_coul;
factor_lj = sp_lj[sbmask(j)];
factor_coul = sp_lj[sbmask(j)+4];
j &= NEIGHMASK;
numtyp4 jx; fetch4(jx,j,pos_tex); //x_[j];
int jtype=jx.w;
// Compute r12
numtyp delx = ix.x-jx.x;
numtyp dely = ix.y-jx.y;
numtyp delz = ix.z-jx.z;
numtyp rsq = delx*delx+dely*dely+delz*delz;
int mtype=itype*lj_types+jtype;
if (rsq<cutsq_sigma[mtype].x) { // cutsq
numtyp r2inv = ucl_recip(rsq);
numtyp forcecoul, forceborn, force, r6inv, prefactor;
numtyp v_sh = (numtyp)0.0;
numtyp rexp = (numtyp)0.0;
if (rsq < cutsq_sigma[mtype].y) { // cut_ljsq
numtyp r = ucl_sqrt(rsq);
rexp = ucl_exp((cutsq_sigma[mtype].z-r)*coeff1[mtype].x);
r6inv = r2inv*r2inv*r2inv;
forceborn = (coeff1[mtype].y*r*rexp - coeff1[mtype].z*r6inv
+ coeff1[mtype].w*r2inv*r6inv)*factor_lj;
} else forceborn = (numtyp)0.0;
if (rsq < cut_coulsq) {
numtyp r=ucl_rsqrt(r2inv);
numtyp arij = alf * r;
numtyp erfcd = ucl_exp(-arij*arij);
fetch(prefactor,j,q_tex);
prefactor *= qqrd2e * qtmp/r;
const numtyp erfcc = erfc(arij);
v_sh = (erfcc - e_shift*r)*prefactor;
numtyp dvdrr = (erfcc/rsq + (numtyp)2.0*alf/MY_PIS * erfcd/r) + f_shift;
forcecoul = prefactor * dvdrr*rsq;
if (factor_coul < (numtyp)1.0) forcecoul -= ((numtyp)1.0-factor_coul)*prefactor;
} else forcecoul = (numtyp)0.0;
force = (forceborn + forcecoul) * r2inv;
f.x+=delx*force;
f.y+=dely*force;
f.z+=delz*force;
if (eflag>0) {
if (rsq < cut_coulsq) {
numtyp e=v_sh;
if (factor_coul < (numtyp)1.0) e -= ((numtyp)1.0-factor_coul)*prefactor;
e_coul += e;
}
if (rsq < cutsq_sigma[mtype].y) {
numtyp e=coeff2[mtype].x*rexp - coeff2[mtype].y*r6inv
+ coeff2[mtype].z*r2inv*r6inv;
energy+=factor_lj*(e-coeff2[mtype].w);
}
}
if (vflag>0) {
virial[0] += delx*delx*force;
virial[1] += dely*dely*force;
virial[2] += delz*delz*force;
virial[3] += delx*dely*force;
virial[4] += delx*delz*force;
virial[5] += dely*delz*force;
}
}
} // for nbor
store_answers_q(f,energy,e_coul,virial,ii,inum,tid,t_per_atom,offset,eflag,
vflag,ans,engv);
} // if ii
}
__kernel void k_born_wolf_fast(const __global numtyp4 *restrict x_,
const __global numtyp4 *restrict coeff1_in,
const __global numtyp4 *restrict coeff2_in,
const __global numtyp *restrict sp_lj_in,
const __global int *dev_nbor,
const __global int *dev_packed,
__global acctyp4 *restrict ans,
__global acctyp *restrict engv,
const int eflag, const int vflag, const int inum,
const int nbor_pitch,
const __global numtyp *restrict q_,
const __global numtyp4 *restrict cutsq_sigma,
const numtyp cut_coulsq, const numtyp qqrd2e,
const numtyp alf, const numtyp e_shift,
const numtyp f_shift, const int t_per_atom) {
int tid, ii, offset;
atom_info(t_per_atom,ii,tid,offset);
__local numtyp4 coeff1[MAX_SHARED_TYPES*MAX_SHARED_TYPES];
__local numtyp4 coeff2[MAX_SHARED_TYPES*MAX_SHARED_TYPES];
__local numtyp sp_lj[8];
if (tid<8)
sp_lj[tid]=sp_lj_in[tid];
if (tid<MAX_SHARED_TYPES*MAX_SHARED_TYPES) {
coeff1[tid]=coeff1_in[tid];
if (eflag>0)
coeff2[tid]=coeff2_in[tid];
}
acctyp energy=(acctyp)0;
acctyp e_coul=(acctyp)0;
acctyp4 f;
f.x=(acctyp)0; f.y=(acctyp)0; f.z=(acctyp)0;
acctyp virial[6];
for (int i=0; i<6; i++)
virial[i]=(acctyp)0;
__syncthreads();
if (ii<inum) {
int nbor, nbor_end;
int i, numj;
__local int n_stride;
nbor_info(dev_nbor,dev_packed,nbor_pitch,t_per_atom,ii,offset,i,numj,
n_stride,nbor_end,nbor);
numtyp4 ix; fetch4(ix,i,pos_tex); //x_[i];
numtyp qtmp; fetch(qtmp,i,q_tex);
int iw=ix.w;
int itype=fast_mul((int)MAX_SHARED_TYPES,iw);
if (eflag>0) {
acctyp e_self = -((acctyp)0.5*e_shift + alf/MY_PIS) *
qtmp*qtmp*qqrd2e/(acctyp)t_per_atom;
e_coul += (acctyp)2.0*e_self;
}
for ( ; nbor<nbor_end; nbor+=n_stride) {
int j=dev_packed[nbor];
numtyp factor_lj, factor_coul;
factor_lj = sp_lj[sbmask(j)];
factor_coul = sp_lj[sbmask(j)+4];
j &= NEIGHMASK;
numtyp4 jx; fetch4(jx,j,pos_tex); //x_[j];
int mtype=itype+jx.w;
// Compute r12
numtyp delx = ix.x-jx.x;
numtyp dely = ix.y-jx.y;
numtyp delz = ix.z-jx.z;
numtyp rsq = delx*delx+dely*dely+delz*delz;
if (rsq<cutsq_sigma[mtype].x) {
numtyp r2inv=ucl_recip(rsq);
numtyp forcecoul, forceborn, force, r6inv, prefactor;
numtyp v_sh = (numtyp)0.0;
numtyp rexp = (numtyp)0.0;
if (rsq < cutsq_sigma[mtype].y) {
numtyp r = ucl_sqrt(rsq);
rexp = ucl_exp((cutsq_sigma[mtype].z-r)*coeff1[mtype].x);
r6inv = r2inv*r2inv*r2inv;
forceborn = (coeff1[mtype].y*r*rexp - coeff1[mtype].z*r6inv
+ coeff1[mtype].w*r2inv*r6inv)*factor_lj;
} else forceborn = (numtyp)0.0;
if (rsq < cut_coulsq) {
numtyp r=ucl_sqrt(rsq);
numtyp arij = alf * r;
numtyp erfcd = ucl_exp(-arij*arij);
fetch(prefactor,j,q_tex);
prefactor *= qqrd2e * qtmp/r;
const numtyp erfcc = erfc(arij);
v_sh = (erfcc - e_shift*r)*prefactor;
numtyp dvdrr = (erfcc/rsq + (numtyp)2.0*alf/MY_PIS * erfcd/r) + f_shift;
forcecoul = prefactor * dvdrr*rsq;
if (factor_coul < (numtyp)1.0) forcecoul -= ((numtyp)1.0-factor_coul)*prefactor;
} else forcecoul = (numtyp)0.0;
force = (forceborn + forcecoul) * r2inv;
f.x+=delx*force;
f.y+=dely*force;
f.z+=delz*force;
if (eflag>0) {
if (rsq < cut_coulsq) {
numtyp e=v_sh;
if (factor_coul < (numtyp)1.0) e -= ((numtyp)1.0-factor_coul)*prefactor;
e_coul += e;
}
if (rsq < cutsq_sigma[mtype].y) {
numtyp e=coeff2[mtype].x*rexp - coeff2[mtype].y*r6inv
+ coeff2[mtype].z*r2inv*r6inv;
energy+=factor_lj*(e-coeff2[mtype].w);
}
}
if (vflag>0) {
virial[0] += delx*delx*force;
virial[1] += dely*dely*force;
virial[2] += delz*delz*force;
virial[3] += delx*dely*force;
virial[4] += delx*delz*force;
virial[5] += dely*delz*force;
}
}
} // for nbor
store_answers_q(f,energy,e_coul,virial,ii,inum,tid,t_per_atom,offset,eflag,
vflag,ans,engv);
} // if ii
}
c4science · Help