Page Menu
Home
c4science
Search
Configure Global Search
Log In
Files
F81331097
lal_soft_ext.cpp
No One
Temporary
Actions
Download File
Edit File
Delete File
View Transforms
Subscribe
Mute Notifications
Award Token
Subscribers
None
File Metadata
Details
File Info
Storage
Attached
Created
Thu, Sep 5, 09:37
Size
4 KB
Mime Type
text/x-c
Expires
Sat, Sep 7, 09:37 (1 d, 23 h)
Engine
blob
Format
Raw Data
Handle
20551855
Attached To
rLAMMPS lammps
lal_soft_ext.cpp
View Options
/***************************************************************************
soft_ext.cpp
-------------------
Trung Dac Nguyen (ORNL)
Functions for LAMMPS access to soft acceleration routines.
__________________________________________________________________________
This file is part of the LAMMPS Accelerator Library (LAMMPS_AL)
__________________________________________________________________________
begin :
email : nguyentd@ornl.gov
***************************************************************************/
#include <iostream>
#include <cassert>
#include <math.h>
#include "lal_soft.h"
using
namespace
std
;
using
namespace
LAMMPS_AL
;
static
Soft
<
PRECISION
,
ACC_PRECISION
>
SLMF
;
// ---------------------------------------------------------------------------
// Allocate memory on host and device and copy constants to device
// ---------------------------------------------------------------------------
int
soft_gpu_init
(
const
int
ntypes
,
double
**
cutsq
,
double
**
host_prefactor
,
double
**
host_cut
,
double
*
special_lj
,
const
int
inum
,
const
int
nall
,
const
int
max_nbors
,
const
int
maxspecial
,
const
double
cell_size
,
int
&
gpu_mode
,
FILE
*
screen
)
{
SLMF
.
clear
();
gpu_mode
=
SLMF
.
device
->
gpu_mode
();
double
gpu_split
=
SLMF
.
device
->
particle_split
();
int
first_gpu
=
SLMF
.
device
->
first_device
();
int
last_gpu
=
SLMF
.
device
->
last_device
();
int
world_me
=
SLMF
.
device
->
world_me
();
int
gpu_rank
=
SLMF
.
device
->
gpu_rank
();
int
procs_per_gpu
=
SLMF
.
device
->
procs_per_gpu
();
SLMF
.
device
->
init_message
(
screen
,
"soft"
,
first_gpu
,
last_gpu
);
bool
message
=
false
;
if
(
SLMF
.
device
->
replica_me
()
==
0
&&
screen
)
message
=
true
;
if
(
message
)
{
fprintf
(
screen
,
"Initializing Device and compiling on process 0..."
);
fflush
(
screen
);
}
int
init_ok
=
0
;
if
(
world_me
==
0
)
init_ok
=
SLMF
.
init
(
ntypes
,
cutsq
,
host_prefactor
,
host_cut
,
special_lj
,
inum
,
nall
,
300
,
maxspecial
,
cell_size
,
gpu_split
,
screen
);
SLMF
.
device
->
world_barrier
();
if
(
message
)
fprintf
(
screen
,
"Done.
\n
"
);
for
(
int
i
=
0
;
i
<
procs_per_gpu
;
i
++
)
{
if
(
message
)
{
if
(
last_gpu
-
first_gpu
==
0
)
fprintf
(
screen
,
"Initializing Device %d on core %d..."
,
first_gpu
,
i
);
else
fprintf
(
screen
,
"Initializing Devices %d-%d on core %d..."
,
first_gpu
,
last_gpu
,
i
);
fflush
(
screen
);
}
if
(
gpu_rank
==
i
&&
world_me
!=
0
)
init_ok
=
SLMF
.
init
(
ntypes
,
cutsq
,
host_prefactor
,
host_cut
,
special_lj
,
inum
,
nall
,
300
,
maxspecial
,
cell_size
,
gpu_split
,
screen
);
SLMF
.
device
->
gpu_barrier
();
if
(
message
)
fprintf
(
screen
,
"Done.
\n
"
);
}
if
(
message
)
fprintf
(
screen
,
"
\n
"
);
if
(
init_ok
==
0
)
SLMF
.
estimate_gpu_overhead
();
return
init_ok
;
}
// ---------------------------------------------------------------------------
// Copy updated constants to device
// ---------------------------------------------------------------------------
void
soft_gpu_reinit
(
const
int
ntypes
,
double
**
cutsq
,
double
**
host_prefactor
,
double
**
host_cut
)
{
int
world_me
=
SLMF
.
device
->
world_me
();
int
gpu_rank
=
SLMF
.
device
->
gpu_rank
();
int
procs_per_gpu
=
SLMF
.
device
->
procs_per_gpu
();
if
(
world_me
==
0
)
SLMF
.
reinit
(
ntypes
,
cutsq
,
host_prefactor
,
host_cut
);
SLMF
.
device
->
world_barrier
();
for
(
int
i
=
0
;
i
<
procs_per_gpu
;
i
++
)
{
if
(
gpu_rank
==
i
&&
world_me
!=
0
)
SLMF
.
reinit
(
ntypes
,
cutsq
,
host_prefactor
,
host_cut
);
SLMF
.
device
->
gpu_barrier
();
}
}
void
soft_gpu_clear
()
{
SLMF
.
clear
();
}
int
**
soft_gpu_compute_n
(
const
int
ago
,
const
int
inum_full
,
const
int
nall
,
double
**
host_x
,
int
*
host_type
,
double
*
sublo
,
double
*
subhi
,
tagint
*
tag
,
int
**
nspecial
,
tagint
**
special
,
const
bool
eflag
,
const
bool
vflag
,
const
bool
eatom
,
const
bool
vatom
,
int
&
host_start
,
int
**
ilist
,
int
**
jnum
,
const
double
cpu_time
,
bool
&
success
)
{
return
SLMF
.
compute
(
ago
,
inum_full
,
nall
,
host_x
,
host_type
,
sublo
,
subhi
,
tag
,
nspecial
,
special
,
eflag
,
vflag
,
eatom
,
vatom
,
host_start
,
ilist
,
jnum
,
cpu_time
,
success
);
}
void
soft_gpu_compute
(
const
int
ago
,
const
int
inum_full
,
const
int
nall
,
double
**
host_x
,
int
*
host_type
,
int
*
ilist
,
int
*
numj
,
int
**
firstneigh
,
const
bool
eflag
,
const
bool
vflag
,
const
bool
eatom
,
const
bool
vatom
,
int
&
host_start
,
const
double
cpu_time
,
bool
&
success
)
{
SLMF
.
compute
(
ago
,
inum_full
,
nall
,
host_x
,
host_type
,
ilist
,
numj
,
firstneigh
,
eflag
,
vflag
,
eatom
,
vatom
,
host_start
,
cpu_time
,
success
);
}
double
soft_gpu_bytes
()
{
return
SLMF
.
host_memory_usage
();
}
Event Timeline
Log In to Comment