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submit_lincoln_omp.sh
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Mon, Nov 11, 21:53

submit_lincoln_omp.sh

#!/bin/sh
#PBS -A <project>
#PBS -l nodes=16:ppn=8
#PBS -q lincoln
#PBS -l walltime=1:00:00
#PBS -N wat-cpu
#PBS
#
cd $PBS_O_WORKDIR
mpirun -npernode 8 --mca mpi_paffinity_alone 0 -x OMP_NUM_THREADS=1 ./lmp_abe -in in.wat-omp -var num 10 -log log.wat-omp
mpirun -npernode 4 --mca mpi_paffinity_alone 0 -x OMP_NUM_THREADS=2 ./lmp_abe -in in.wat-omp -var num 10 -log log.wat-omp2
mpirun -npernode 2 --mca mpi_paffinity_alone 0 -x OMP_NUM_THREADS=4 ./lmp_abe -in in.wat-omp -var num 10 -log log.wat-omp3

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