Homec4science
Diffusion lammps (lammm-devel) Browse

lammps/lib/atc/KD_Tree.h
d77ab2f96a57lammm-devel

Last Change
Raw File

KD_Tree.h
View Options

#ifndef KD_TREE_H
#define KD_TREE_H
#include "Array2D.h"
#include "MatrixDef.h"
#include "MatrixLibrary.h"
#include <math.h>
#include <vector>
#include <utility>
class Node {
public:
Node() {
// Zero argument constructor just for default initialization.
}
Node(int node, double x, double y, double z)
: index_(node)
{
coords_[0] = x;
coords_[1] = y;
coords_[2] = z;
}
int index_;
double coords_[3];
double distanceSquared(Node query) {
return pow(coords_[0] - query.coords_[0], 2)
+ pow(coords_[1] - query.coords_[1], 2)
+ pow(coords_[2] - query.coords_[2], 2);
}
double distanceInDimension(Node query, int dimension) {
return pow(coords_[dimension] - query.coords_[dimension], 2);
}
bool lessThanInDimension(Node query, int dimension) {
if (dimension == 0) return Node::compareX(*this, query);
else if (dimension == 1) return Node::compareY(*this, query);
else if (dimension == 2) return Node::compareZ(*this, query);
else return false;
}
bool operator==(const Node &rhs) {
return ((*this).coords_[0] == rhs.coords_[0] &&
(*this).coords_[1] == rhs.coords_[1] &&
(*this).coords_[2] == rhs.coords_[2]);
}
static bool compareX(Node one, Node two) { return one.coords_[0] < two.coords_[0]; }
static bool compareY(Node one, Node two) { return one.coords_[1] < two.coords_[1]; }
static bool compareZ(Node one, Node two) { return one.coords_[2] < two.coords_[2]; }
};
typedef std::pair<int,std::vector<Node> > Elem;
class KD_Tree {
public:
static KD_Tree* create_KD_tree(const int nNodesPerElement, const int nNodes,
const DENS_MAT *points, const int nElems,
const Array2D<int> &conn);
KD_Tree(std::vector<Node> *points, std::vector<Elem> *elems,
int dimension=0);
~KD_Tree();
std::vector<int> find_nearest(DENS_VEC query) {
// Create a fake Node and find the nearest Node in the tree to it.
return find_nearest_elements(Node(-1, query(0), query(1), query(2)));
}
std::vector<int> find_nearest_elements(Node query, int dimension=0);
std::vector<std::vector<int> > getElemIDs(int depth);
private:
Node value_;
std::vector<Node> *sortedPts_;
std::vector<Elem> *candElems_;
KD_Tree *leftChild_;
KD_Tree *rightChild_;
};
#endif
c4science · Help