manifold_thylakoid_shared.h
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	#ifndef MANIFOLD_THYLAKOID_SHARED_H
	#define MANIFOLD_THYLAKOID_SHARED_H


	#include "lmptype.h"
	#include <vector>

	namespace LAMMPS_NS {

	namespace user_manifold {


	// The thylakoid is composed of many parts
	struct thyla_part {
	enum thyla_types {
	THYLA_TYPE_PLANE,
	THYLA_TYPE_SPHERE,
	THYLA_TYPE_CYL,
	THYLA_TYPE_CYL_TO_PLANE
	};

	thyla_part( int type, double *args, double xlo, double ylo, double zlo,
	double xhi, double yhi, double zhi );
	thyla_part() : type(-1), x0(-1337), y0(-1337), z0(-1337){}
	~thyla_part();

	double g( const double *x );
	void n( const double x, double n );

	int type;
	double params[7];
	double tol;
	int maxit;

	int err_flag;
	tagint a_id;

	double xlo, xhi, ylo, yhi, zlo, zhi;
	double x0, y0, z0;

	}; // struct thyla_part



	struct thyla_part_geom {
	thyla_part_geom() : pt(3), lo(3), hi(3){}
	std::vector<double> pt, lo, hi;

	// Function for mirroring thyla_geoms:
	enum DIRS { DIR_X, DIR_Y, DIR_Z };
	static void mirror( unsigned int axis, thyla_part_geom *m,
	const thyla_part_geom *o );

	}; // struct thyla_part_geom


	} // namespace user_manifold


	} // namespace LAMMPS_NS


	#endif // MANIFOLD_THYLAKOID_SHARED_H