Page MenuHomec4science
Files F71949704

thr_data.h
No OneTemporary
Actions

File Metadata

Created
Sat, Jul 13, 22:09

thr_data.h
View Options

/* -*- c++ -*- -------------------------------------------------------------
LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator
http://lammps.sandia.gov, Sandia National Laboratories
Steve Plimpton, sjplimp@sandia.gov
Copyright (2003) Sandia Corporation. Under the terms of Contract
DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains
certain rights in this software. This software is distributed under
the GNU General Public License.
See the README file in the top-level LAMMPS directory.
------------------------------------------------------------------------- */
/* ----------------------------------------------------------------------
Contributing author: Axel Kohlmeyer (Temple U)
------------------------------------------------------------------------- */
#ifndef LMP_THR_DATA_H
#define LMP_THR_DATA_H
#if defined(_OPENMP)
#include <omp.h>
#endif
#include "timer.h"
namespace LAMMPS_NS {
// per thread data accumulators
// there should be one instance
// of this class for each thread.
class ThrData {
friend class FixOMP;
friend class ThrOMP;
public:
ThrData(int tid, class Timer *t);
~ThrData() { delete _timer; _timer = NULL; };
void check_tid(int); // thread id consistency check
int get_tid() const { return _tid; }; // our thread id.
// inline wrapper, to make this more efficient
// when per-thread timers are off
void timer(enum Timer::ttype flag) { if (_timer) _stamp(flag); };
double get_time(enum Timer::ttype flag);
// erase accumulator contents and hook up force arrays
void init_force(int, double **, double **, double *, double *, double *);
// give access to per-thread offset arrays
double **get_f() const { return _f; };
double **get_torque() const { return _torque; };
double *get_de() const { return _de; };
double *get_drho() const { return _drho; };
// setup and erase per atom arrays
void init_adp(int, double *, double **, double **); // ADP (+ EAM)
void init_cdeam(int, double *, double *, double *); // CDEAM (+ EAM)
void init_eam(int, double *); // EAM
void init_eim(int, double *, double *); // EIM (+ EAM)
void init_pppm(int, class Memory *);
void init_pppm_disp(int, class Memory *);
// access methods for arrays that we handle in this class
double **get_lambda() const { return _lambda; };
double **get_mu() const { return _mu; };
double *get_D_values() const { return _D_values; };
double *get_fp() const { return _fp; };
double *get_rho() const { return _rho; };
double *get_rhoB() const { return _rhoB; };
void *get_rho1d() const { return _rho1d; };
void *get_drho1d() const { return _drho1d; };
void *get_rho1d_6() const { return _rho1d_6; };
void *get_drho1d_6() const { return _drho1d_6; };
private:
double eng_vdwl; // non-bonded non-coulomb energy
double eng_coul; // non-bonded coulomb energy
double eng_bond; // bond energy
double eng_angle; // angle energy
double eng_dihed; // dihedral energy
double eng_imprp; // improper energy
double eng_kspce; // kspace energy
double virial_pair[6]; // virial contribution from non-bonded
double virial_bond[6]; // virial contribution from bonds
double virial_angle[6]; // virial contribution from angles
double virial_dihed[6]; // virial contribution from dihedrals
double virial_imprp[6]; // virial contribution from impropers
double virial_kspce[6]; // virial contribution from kspace
double *eatom_pair;
double *eatom_bond;
double *eatom_angle;
double *eatom_dihed;
double *eatom_imprp;
double *eatom_kspce;
double **vatom_pair;
double **vatom_bond;
double **vatom_angle;
double **vatom_dihed;
double **vatom_imprp;
double **vatom_kspce;
// per thread segments of various force or similar arrays
// these are maintained by atom styles
double **_f;
double **_torque;
double *_erforce;
double *_de;
double *_drho;
// these are maintained by individual pair styles
double **_mu, **_lambda; // ADP (+ EAM)
double *_rhoB, *_D_values; // CDEAM (+ EAM)
double *_rho; // EAM
double *_fp; // EIM (+ EAM)
// this is for pppm/omp
void *_rho1d;
void *_drho1d;
// this is for pppm/disp/omp
void *_rho1d_6;
void *_drho1d_6;
// my thread id
const int _tid;
// timer info
int _timer_active;
class Timer *_timer;
private:
void _stamp(enum Timer::ttype flag);
public:
// compute global per thread virial contribution from global forces and positions
void virial_fdotr_compute(double **, int, int, int);
double memory_usage();
// disabled default methods
private:
ThrData() : _tid(-1), _timer(NULL) {};
};
////////////////////////////////////////////////////////////////////////
// helper functions operating on data replicated for thread support //
////////////////////////////////////////////////////////////////////////
// generic per thread data reduction for continous arrays of nthreads*nmax size
void data_reduce_thr(double *, int, int, int, int);
}
#endif

Event Timeline

c4science · Help