README.sh
4a1807d39739lammm-master-deprecated

README.sh
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			# The version of "2bead.lt" in this directory is defines two types of
			# molecules (named "2bead/H" and "2bead/P").
			#
			# However, there is another version of this file which is easier to understand.
			# I recommend reading that file first.
			# It is located at "simplified_version_one_residue/2bead.lt".
			# It defines only one type of molecule (named "2bead")
			# It is much simpler.

			# ------

			# Use these commands to generate the LAMMPS input script and data file
			# (and other auxilliary files):

			# run moltemplate

			moltemplate.sh system.lt

			# This will generate various files with names ending in .in and *.data.