Homec4science
Diffusion lammps (lammm-master) Browse

lammps/src/MISC/dump_xtc.h
d55f968432a4lammm-master

Last Change
Raw File

dump_xtc.h
View Options

/* -*- c++ -*- ----------------------------------------------------------
LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator
http://lammps.sandia.gov, Sandia National Laboratories
Steve Plimpton, sjplimp@sandia.gov
Copyright (2003) Sandia Corporation. Under the terms of Contract
DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains
certain rights in this software. This software is distributed under
the GNU General Public License.
See the README file in the top-level LAMMPS directory.
------------------------------------------------------------------------- */
#ifdef DUMP_CLASS
DumpStyle(xtc,DumpXTC)
#else
#ifndef LMP_DUMP_XTC_H
#define LMP_DUMP_XTC_H
#include "dump.h"
#ifdef LAMMPS_XDR
#include "xdr_compat.h"
#else
#include "rpc/rpc.h"
#include "rpc/xdr.h"
#endif
namespace LAMMPS_NS {
class DumpXTC : public Dump {
public:
DumpXTC(class LAMMPS *, int, char**);
virtual ~DumpXTC();
private:
int natoms,ntotal;
int nevery_save;
int unwrap_flag; // 1 if atom coords are unwrapped, 0 if no
float precision; // user-adjustable precision setting
float *coords;
double sfactor,tfactor; // scaling factors for positions and time unit
XDR xd;
void init_style();
int modify_param(int, char **);
void openfile();
void write_header(bigint);
void pack(tagint *);
void write_data(int, double *);
bigint memory_usage();
void write_frame();
};
}
#endif
#endif
/* ERROR/WARNING messages:
E: Illegal ... command
Self-explanatory. Check the input script syntax and compare to the
documentation for the command. You can use -echo screen as a
command-line option when running LAMMPS to see the offending line.
E: Invalid dump xtc filename
Filenames used with the dump xtc style cannot be binary or compressed
or cause multiple files to be written.
E: Too many atoms for dump xtc
The system size must fit in a 32-bit integer to use this dump
style.
W: No automatic unit conversion to XTC file format conventions possible for units lj
This means no scaling will be performed.
E: Dump xtc requires sorting by atom ID
Use the dump_modify sort command to enable this.
E: Cannot set dump_modify flush for dump xtc
Self-explanatory.
E: Cannot use variable every setting for dump xtc
The format of this file requires snapshots at regular intervals.
E: Cannot change dump_modify every for dump xtc
The frequency of writing dump xtc snapshots cannot be changed.
E: Cannot open dump file
Self-explanatory.
E: Too big a timestep for dump xtc
The timestep must fit in a 32-bit integer to use this dump style.
E: Illegal dump_modify sfactor value (must be > 0.0)
Self-explanatory.
E: Illegal dump_modify tfactor value (must be > 0.0)
Self-explanatory.
*/
c4science · Help