Page Menu
Home
c4science
Search
Configure Global Search
Log In
Files
F106851405
fix_drude.html
No One
Temporary
Actions
Download File
Edit File
Delete File
View Transforms
Subscribe
Mute Notifications
Award Token
Subscribers
None
File Metadata
Details
File Info
Storage
Attached
Created
Tue, Apr 1, 13:13
Size
8 KB
Mime Type
text/html
Expires
Thu, Apr 3, 13:13 (2 d)
Engine
blob
Format
Raw Data
Handle
25288956
Attached To
rLAMMPS lammps
fix_drude.html
View Options
<!DOCTYPE html>
<!--[if IE 8]><html class="no-js lt-ie9" lang="en" > <![endif]-->
<!--[if gt IE 8]><!-->
<html
class=
"no-js"
lang=
"en"
>
<!--<![endif]-->
<head>
<meta
charset=
"utf-8"
>
<meta
name=
"viewport"
content=
"width=device-width, initial-scale=1.0"
>
<title>
fix drude command
—
LAMMPS 15 Dec 2015 documentation
</title>
<link
rel=
"stylesheet"
href=
"_static/css/theme.css"
type=
"text/css"
/>
<link
rel=
"stylesheet"
href=
"_static/sphinxcontrib-images/LightBox2/lightbox2/css/lightbox.css"
type=
"text/css"
/>
<link
rel=
"top"
title=
"LAMMPS 15 Dec 2015 documentation"
href=
"index.html"
/>
<script
src=
"_static/js/modernizr.min.js"
></script>
</head>
<body
class=
"wy-body-for-nav"
role=
"document"
>
<div
class=
"wy-grid-for-nav"
>
<nav
data-toggle=
"wy-nav-shift"
class=
"wy-nav-side"
>
<div
class=
"wy-side-nav-search"
>
<a
href=
"Manual.html"
class=
"icon icon-home"
>
LAMMPS
</a>
<div
role=
"search"
>
<form
id=
"rtd-search-form"
class=
"wy-form"
action=
"search.html"
method=
"get"
>
<input
type=
"text"
name=
"q"
placeholder=
"Search docs"
/>
<input
type=
"hidden"
name=
"check_keywords"
value=
"yes"
/>
<input
type=
"hidden"
name=
"area"
value=
"default"
/>
</form>
</div>
</div>
<div
class=
"wy-menu wy-menu-vertical"
data-spy=
"affix"
role=
"navigation"
aria-label=
"main navigation"
>
<ul>
<li
class=
"toctree-l1"
><a
class=
"reference internal"
href=
"Section_intro.html"
>
1. Introduction
</a></li>
<li
class=
"toctree-l1"
><a
class=
"reference internal"
href=
"Section_start.html"
>
2. Getting Started
</a></li>
<li
class=
"toctree-l1"
><a
class=
"reference internal"
href=
"Section_commands.html"
>
3. Commands
</a></li>
<li
class=
"toctree-l1"
><a
class=
"reference internal"
href=
"Section_packages.html"
>
4. Packages
</a></li>
<li
class=
"toctree-l1"
><a
class=
"reference internal"
href=
"Section_accelerate.html"
>
5. Accelerating LAMMPS performance
</a></li>
<li
class=
"toctree-l1"
><a
class=
"reference internal"
href=
"Section_howto.html"
>
6. How-to discussions
</a></li>
<li
class=
"toctree-l1"
><a
class=
"reference internal"
href=
"Section_example.html"
>
7. Example problems
</a></li>
<li
class=
"toctree-l1"
><a
class=
"reference internal"
href=
"Section_perf.html"
>
8. Performance
&
scalability
</a></li>
<li
class=
"toctree-l1"
><a
class=
"reference internal"
href=
"Section_tools.html"
>
9. Additional tools
</a></li>
<li
class=
"toctree-l1"
><a
class=
"reference internal"
href=
"Section_modify.html"
>
10. Modifying
&
extending LAMMPS
</a></li>
<li
class=
"toctree-l1"
><a
class=
"reference internal"
href=
"Section_python.html"
>
11. Python interface to LAMMPS
</a></li>
<li
class=
"toctree-l1"
><a
class=
"reference internal"
href=
"Section_errors.html"
>
12. Errors
</a></li>
<li
class=
"toctree-l1"
><a
class=
"reference internal"
href=
"Section_history.html"
>
13. Future and history
</a></li>
</ul>
</div>
</nav>
<section
data-toggle=
"wy-nav-shift"
class=
"wy-nav-content-wrap"
>
<nav
class=
"wy-nav-top"
role=
"navigation"
aria-label=
"top navigation"
>
<i
data-toggle=
"wy-nav-top"
class=
"fa fa-bars"
></i>
<a
href=
"Manual.html"
>
LAMMPS
</a>
</nav>
<div
class=
"wy-nav-content"
>
<div
class=
"rst-content"
>
<div
role=
"navigation"
aria-label=
"breadcrumbs navigation"
>
<ul
class=
"wy-breadcrumbs"
>
<li><a
href=
"Manual.html"
>
Docs
</a>
»
</li>
<li>
fix drude command
</li>
<li
class=
"wy-breadcrumbs-aside"
>
<a
href=
"http://lammps.sandia.gov"
>
Website
</a>
<a
href=
"Section_commands.html#comm"
>
Commands
</a>
</li>
</ul>
<hr/>
</div>
<div
role=
"main"
class=
"document"
itemscope=
"itemscope"
itemtype=
"http://schema.org/Article"
>
<div
itemprop=
"articleBody"
>
<div
class=
"section"
id=
"fix-drude-command"
>
<span
id=
"index-0"
></span><h1>
fix drude command
<a
class=
"headerlink"
href=
"#fix-drude-command"
title=
"Permalink to this headline"
>
¶
</a></h1>
<div
class=
"section"
id=
"syntax"
>
<h2>
Syntax
<a
class=
"headerlink"
href=
"#syntax"
title=
"Permalink to this headline"
>
¶
</a></h2>
<div
class=
"highlight-python"
><div
class=
"highlight"
><pre>
fix ID group-ID drude flag1 flag2 ... flagN
</pre></div>
</div>
<ul
class=
"simple"
>
<li>
ID, group-ID are documented in
<a
class=
"reference internal"
href=
"fix.html"
><em>
fix
</em></a>
command
</li>
<li>
drude = style name of this fix command
</li>
<li>
flag1 flag2 ... flagN = Drude flag for each atom type (1 to N) in the system
</li>
</ul>
</div>
<div
class=
"section"
id=
"examples"
>
<h2>
Examples
<a
class=
"headerlink"
href=
"#examples"
title=
"Permalink to this headline"
>
¶
</a></h2>
<div
class=
"highlight-python"
><div
class=
"highlight"
><pre>
fix 1 all drude 1 1 0 1 0 2 2 2
fix 1 all drude C C N C N D D D
</pre></div>
</div>
</div>
<div
class=
"section"
id=
"description"
>
<h2>
Description
<a
class=
"headerlink"
href=
"#description"
title=
"Permalink to this headline"
>
¶
</a></h2>
<p>
Assign each atom type in the system to be one of 3 kinds of atoms
within the Drude polarization model. This fix is designed to be
used with the
<a
class=
"reference internal"
href=
"tutorial_drude.html"
><em>
thermalized Drude oscillator model
</em></a>
. Polarizable models in LAMMPS
are described in
<a
class=
"reference internal"
href=
"Section_howto.html#howto-25"
><span>
this Section
</span></a>
.
</p>
<p>
The three possible types can be designated with an integer (0,1,2)
or capital letter (N,C,D):
</p>
<ul
class=
"simple"
>
<li>
0 or N = non-polarizable atom (not part of Drude model)
</li>
<li>
1 or C = Drude core
</li>
<li>
2 or D = Drude electron
</li>
</ul>
</div>
<div
class=
"section"
id=
"restrictions"
>
<h2>
Restrictions
<a
class=
"headerlink"
href=
"#restrictions"
title=
"Permalink to this headline"
>
¶
</a></h2>
<p>
This fix should be invoked before any other commands that implement
the Drude oscillator model, such as
<a
class=
"reference internal"
href=
"fix_langevin_drude.html"
><em>
fix langevin/drude
</em></a>
,
<a
class=
"reference internal"
href=
"fix_drude_transform.html"
><em>
fix drude/transform
</em></a>
,
<a
class=
"reference internal"
href=
"compute_temp_drude.html"
><em>
compute temp/drude
</em></a>
,
<a
class=
"reference internal"
href=
"pair_thole.html"
><em>
pair_style thole
</em></a>
.
</p>
</div>
<div
class=
"section"
id=
"related-commands"
>
<h2>
Related commands
<a
class=
"headerlink"
href=
"#related-commands"
title=
"Permalink to this headline"
>
¶
</a></h2>
<p><a
class=
"reference internal"
href=
"fix_langevin_drude.html"
><em>
fix langevin/drude
</em></a>
,
<a
class=
"reference internal"
href=
"fix_drude_transform.html"
><em>
fix drude/transform
</em></a>
,
<a
class=
"reference internal"
href=
"compute_temp_drude.html"
><em>
compute temp/drude
</em></a>
,
<a
class=
"reference internal"
href=
"pair_thole.html"
><em>
pair_style thole
</em></a></p>
<p><strong>
Default:
</strong>
None
</p>
</div>
</div>
</div>
</div>
<footer>
<hr/>
<div
role=
"contentinfo"
>
<p>
©
Copyright 2013 Sandia Corporation.
</p>
</div>
Built with
<a
href=
"http://sphinx-doc.org/"
>
Sphinx
</a>
using a
<a
href=
"https://github.com/snide/sphinx_rtd_theme"
>
theme
</a>
provided by
<a
href=
"https://readthedocs.org"
>
Read the Docs
</a>
.
</footer>
</div>
</div>
</section>
</div>
<script
type=
"text/javascript"
>
var
DOCUMENTATION_OPTIONS
=
{
URL_ROOT
:
'./'
,
VERSION
:
'15 Dec 2015'
,
COLLAPSE_INDEX
:
false
,
FILE_SUFFIX
:
'.html'
,
HAS_SOURCE
:
true
};
</script>
<script
type=
"text/javascript"
src=
"_static/jquery.js"
></script>
<script
type=
"text/javascript"
src=
"_static/underscore.js"
></script>
<script
type=
"text/javascript"
src=
"_static/doctools.js"
></script>
<script
type=
"text/javascript"
src=
"https://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"
></script>
<script
type=
"text/javascript"
src=
"_static/sphinxcontrib-images/LightBox2/lightbox2/js/jquery-1.11.0.min.js"
></script>
<script
type=
"text/javascript"
src=
"_static/sphinxcontrib-images/LightBox2/lightbox2/js/lightbox.min.js"
></script>
<script
type=
"text/javascript"
src=
"_static/sphinxcontrib-images/LightBox2/lightbox2-customize/jquery-noconflict.js"
></script>
<script
type=
"text/javascript"
src=
"_static/js/theme.js"
></script>
<script
type=
"text/javascript"
>
jQuery
(
function
()
{
SphinxRtdTheme
.
StickyNav
.
enable
();
});
</script>
</body>
</html>
Event Timeline
Log In to Comment