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lammps/examples/USER/lb/polymer/out.polymer_default_gamma
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out.polymer_default_gamma
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LAMMPS (10 Aug 2015)
Reading data file ...
orthogonal box = (0 0 0) to (40 40 40)
2 by 2 by 4 MPI processor grid
reading atoms ...
992 atoms
scanning bonds ...
1 = max bonds/atom
reading bonds ...
31 bonds
Finding 1-2 1-3 1-4 neighbors ...
Special bond factors lj: 0 1 1
Special bond factors coul: 0 1 1
2 = max # of 1-2 neighbors
2 = max # of special neighbors
32 atoms in group ForceAtoms
960 atoms in group FluidAtoms
Using a lattice-Boltzmann grid of 40 by 40 by 40 total grid points. (../fix_lb_fluid.cpp:385)
32 rigid bodies with 992 atoms
Neighbor list info ...
1 neighbor list requests
update every 1 steps, delay 0 steps, check yes
master list distance cutoff = 2.18369
ghost atom cutoff = 2.18369
Setting up Verlet run ...
Unit style : nano
Current step: 0
Time step : 3e-05
Memory usage per processor = 0.111926 Mbytes
Step Temp E_pair E_mol TotEng Press
0 0 -8.2758489 2790.7741 2782.4982 1.9081958e-20
2000001 4.3017148 0 2792.6037 2798.2163 -0.00077006865
Loop time of 51900 on 16 procs for 2000001 steps with 992 atoms
Pair time (%) = 4.33729 (0.00835701)
Bond time (%) = 3.33134 (0.00641876)
Neigh time (%) = 35.1247 (0.0676777)
Comm time (%) = 61.528 (0.118551)
Outpt time (%) = 0.361813 (0.000697135)
Other time (%) = 51795.3 (99.7983)
Nlocal: 62 ave 465 max 0 min
Histogram: 11 0 3 1 0 0 0 0 0 1
Nghost: 94.8125 ave 340 max 0 min
Histogram: 9 0 0 0 4 0 0 1 0 2
Neighs: 0.25 ave 2 max 0 min
Histogram: 13 0 0 0 0 2 0 0 0 1
Total # of neighbors = 4
Ave neighs/atom = 0.00403226
Ave special neighs/atom = 0.0625
Neighbor list builds = 23853
Dangerous builds = 0
------------------------------------------------------------
Sender: LSF System <lsfadmin@lsfhost.localdomain>
Subject: Job 883849: </opt/hpmpi/bin/mpirun -srun ./lmp_mpi -in in.polymer_default_gamma> Done
Job </opt/hpmpi/bin/mpirun -srun ./lmp_mpi -in in.polymer_default_gamma> was submitted from host <req770> by user <colin>.
Job was executed on host(s) <16*lsfhost.localdomain>, in queue <mpi>, as user <colin>.
</home/colin> was used as the home directory.
</home/colin/lammps-10Aug15/examples/USER/lb/tested/polymer_default> was used as the working directory.
Started at Mon Aug 24 11:13:12 2015
Results reported at Tue Aug 25 01:38:50 2015
Your job looked like:
------------------------------------------------------------
# LSBATCH: User input
/opt/hpmpi/bin/mpirun -srun ./lmp_mpi -in in.polymer_default_gamma
------------------------------------------------------------
Successfully completed.
Resource usage summary:
CPU time : 829343.88 sec.
Max Memory : 43 MB
Max Swap : 805 MB
The output (if any) is above this job summary.
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