units lj dimension 3 boundary p p p atom_style atomic # truncated and shifted LJ potential pair_style lj/cut 2.5 pair_modify shift yes # fcc lattice lattice fcc 0.9731 region my_box block 0 8.0 0 8.0 0 20.0 create_box 1 my_box region particles block 0 8.0 0 8.0 0 20.0 create_atoms 1 region particles pair_coeff 1 1 1.0 1.0 2.5 mass 1 1.0 change_box all z final 0.0 34 remap units box # select particles in one side of the elongated box region left plane 0 0 10 0 0 1 group left region left velocity left create 6.0 1 mom yes rot yes # simulation parameters neighbor 0.6 bin timestep 0.004 run_style verlet fix ensemble left nve # Note: only move particle in left-hand side fix langevin left langevin 3.0 0.8 100.0 2017 # outout thermo_style custom step temp pzz pe lz thermo 100 # dump dumpXYZ all xyz 100 traj.xyz # run reduced for demonstration purposes # run 10000 run 5000 write_data data.halfhalf