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lammps/examples/body/log.body.1Feb13.linux.4
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LAMMPS (1 Feb 2013)
# 2d polygon nparticle bodies
units lj
dimension 2
atom_style body nparticle 2 6
read_data data.body
orthogonal box = (-15.5322 -15.5322 -0.5) to (15.5322 15.5322 0.5)
2 by 2 by 1 MPI processor grid
100 atoms
100 bodies
velocity all create 1.44 87287 loop geom
pair_style body 5.0
pair_coeff * * 1.0 1.0
neighbor 0.3 bin
fix 1 all nve/body
fix 2 all enforce2d
#compute 1 all body/local type 1 2 3
#dump 2 all local 100 dump.body index c_1[1] c_1[2] c_1[3] c_1[4]
thermo 500
run 10000
Memory usage per processor = 3.10704 Mbytes
Step Temp E_pair E_mol TotEng Press
0 1.44 -0.63799525 0 0.78760475 -0.15028724
500 1.5537157 -1.5243356 0 0.013843001 0.2654775
1000 1.5681616 -1.8003444 0 -0.2478644 0.07601415
1500 1.6994347 -1.7246456 0 -0.042205239 0.36645011
2000 1.6586974 -1.6970115 0 -0.054901078 0.10137999
2500 1.7878623 -1.8213737 0 -0.051390011 0.35530747
3000 1.7043715 -1.6613359 0 0.025991881 0.27048518
3500 1.6313416 -1.5250929 0 0.089935264 0.10510436
4000 1.5883641 -1.7692022 0 -0.1967218 0.50882304
4500 1.5897207 -1.5634198 0 0.010403642 0.24598267
5000 1.4849734 -1.5512049 0 -0.081081244 -0.028399888
5500 1.6074988 -1.7000582 0 -0.10863448 0.42879191
6000 1.6106093 -1.5850749 0 0.0094282394 0.4115976
6500 1.8169151 -1.7996899 0 -0.00094400747 0.21677584
7000 1.5487579 -1.6028263 0 -0.069555913 0.23742891
7500 1.7231927 -1.8001082 0 -0.094147408 -0.016712191
8000 1.5832288 -1.7242109 0 -0.15681439 0.33204
8500 1.9002455 -1.866332 0 0.014911066 0.28393405
9000 1.5916225 -1.6032424 0 -0.027536096 0.48213053
9500 1.6326075 -1.7974673 0 -0.18118584 0.078132294
10000 1.3851677 -1.49406 0 -0.12274404 0.18606978
Loop time of 0.70715 on 4 procs for 10000 steps with 100 atoms
Pair time (%) = 0.471205 (66.6343)
Neigh time (%) = 0.00455165 (0.643661)
Comm time (%) = 0.174367 (24.6578)
Outpt time (%) = 0.000492573 (0.069656)
Other time (%) = 0.0565341 (7.99463)
Nlocal: 25 ave 25 max 25 min
Histogram: 4 0 0 0 0 0 0 0 0 0
Nghost: 43.75 ave 48 max 40 min
Histogram: 1 1 0 0 0 0 0 1 0 1
Neighs: 101.5 ave 113 max 91 min
Histogram: 1 1 0 0 0 0 0 1 0 1
Total # of neighbors = 406
Ave neighs/atom = 4.06
Neighbor list builds = 805
Dangerous builds = 97
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