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lammps/examples/comb/log.comb3.1Feb14.linux.1
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LAMMPS (1 Feb 2014)
# Graphene-OH on Cu2O (110) surface
units metal
atom_style charge
dimension 3
boundary p p p
read_data data.comb3-OHCCu
triclinic box = (0 0 0) to (21.3 24.6 23.8162) with tilt (0 0 0)
1 by 1 by 1 MPI processor grid
reading atoms ...
682 atoms
mass 1 16.0
mass 2 63.5
mass 3 1.00
mass 4 12.0
mass 5 12.0
pair_style comb3 polar_off
pair_coeff * * ffield.comb3 O Cu H C C
neighbor 2.0 bin
neigh_modify every 1 delay 0 check yes
#dump 1 all cfg 10 *.cfg mass type xs ys zs id type q
#dump_modify 1 element O Cu H C C
fix 1 all nve
fix 2 all qeq/comb 10 1e-3 file fq.out
timestep 0.00020
thermo_style custom step temp etotal pe evdwl ecoul press vol lx ly lz
thermo_modify norm yes
velocity all create 300.0 2398378
thermo 10
run 100
Memory usage per processor = 25.3823 Mbytes
Step Temp TotEng PotEng E_vdwl E_coul Press Volume Lx Ly Lz
0 300 -4.3728818 -4.411603 -3.8436746 -0.56792838 -21237.662 12479.212 21.3 24.6 23.8162
10 458.94724 -4.372855 -4.4320916 -3.8642354 -0.56785622 -18031.328 12479.212 21.3 24.6 23.8162
20 745.4043 -4.3728584 -4.4690682 -3.900652 -0.56841626 -17212.152 12479.212 21.3 24.6 23.8162
30 919.29702 -4.3729441 -4.4915983 -3.9225391 -0.56905928 -18506.161 12479.212 21.3 24.6 23.8162
40 966.9902 -4.3732198 -4.4980298 -3.9279672 -0.57006265 -27598.629 12479.212 21.3 24.6 23.8162
50 954.6119 -4.3732154 -4.4964277 -3.925068 -0.5713597 -23707.986 12479.212 21.3 24.6 23.8162
60 1052.8699 -4.3733735 -4.5092681 -3.9366105 -0.57265757 2649.3253 12479.212 21.3 24.6 23.8162
70 1183.0233 -4.3735985 -4.526292 -3.9524058 -0.57388625 9391.824 12479.212 21.3 24.6 23.8162
80 1248.4286 -4.373826 -4.5349614 -3.9598431 -0.5751183 12244.153 12479.212 21.3 24.6 23.8162
90 1294.4259 -4.3741281 -4.5412004 -3.9649553 -0.57624518 17321.594 12479.212 21.3 24.6 23.8162
100 1322.0463 -4.37436 -4.5449973 -3.9676616 -0.57733571 21583.518 12479.212 21.3 24.6 23.8162
Loop time of 18.5024 on 1 procs for 100 steps with 682 atoms
Pair time (%) = 8.40819 (45.4438)
Neigh time (%) = 0.074784 (0.404186)
Comm time (%) = 0.00549436 (0.0296954)
Outpt time (%) = 0.000240088 (0.0012976)
Other time (%) = 10.0137 (54.121)
Nlocal: 682 ave 682 max 682 min
Histogram: 1 0 0 0 0 0 0 0 0 0
Nghost: 6390 ave 6390 max 6390 min
Histogram: 1 0 0 0 0 0 0 0 0 0
Neighs: 0 ave 0 max 0 min
Histogram: 1 0 0 0 0 0 0 0 0 0
FullNghs: 365314 ave 365314 max 365314 min
Histogram: 1 0 0 0 0 0 0 0 0 0
Total # of neighbors = 365314
Ave neighs/atom = 535.651
Neighbor list builds = 1
Dangerous builds = 0
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