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manifold_thylakoid_shared.h
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Sat, Oct 19, 21:05
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text/x-c
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Mon, Oct 21, 21:05 (2 d)
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blob
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rLAMMPS lammps
manifold_thylakoid_shared.h
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#ifndef MANIFOLD_THYLAKOID_SHARED_H
#define MANIFOLD_THYLAKOID_SHARED_H
#include "lmptype.h"
#include <vector>
namespace
LAMMPS_NS
{
namespace
user_manifold
{
// The thylakoid is composed of many parts
struct
thyla_part
{
enum
thyla_types
{
THYLA_TYPE_PLANE
,
THYLA_TYPE_SPHERE
,
THYLA_TYPE_CYL
,
THYLA_TYPE_CYL_TO_PLANE
};
thyla_part
(
int
type
,
double
*
args
,
double
xlo
,
double
ylo
,
double
zlo
,
double
xhi
,
double
yhi
,
double
zhi
);
thyla_part
()
:
type
(
-
1
),
x0
(
-
1337
),
y0
(
-
1337
),
z0
(
-
1337
){}
~
thyla_part
();
double
g
(
const
double
*
x
);
void
n
(
const
double
*
x
,
double
*
n
);
int
type
;
double
params
[
7
];
double
tol
;
int
maxit
;
int
err_flag
;
tagint
a_id
;
double
xlo
,
xhi
,
ylo
,
yhi
,
zlo
,
zhi
;
double
x0
,
y0
,
z0
;
};
// struct thyla_part
struct
thyla_part_geom
{
thyla_part_geom
()
:
pt
(
3
),
lo
(
3
),
hi
(
3
){}
std
::
vector
<
double
>
pt
,
lo
,
hi
;
// Function for mirroring thyla_geoms:
enum
DIRS
{
DIR_X
,
DIR_Y
,
DIR_Z
};
static
void
mirror
(
unsigned
int
axis
,
thyla_part_geom
*
m
,
const
thyla_part_geom
*
o
);
};
// struct thyla_part_geom
}
// namespace user_manifold
}
// namespace LAMMPS_NS
#endif
// MANIFOLD_THYLAKOID_SHARED_H
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