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rna_sequence.py
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Wed, Jul 9, 07:49

rna_sequence.py
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#!/usr/bin/env python
# -*- coding: utf-8 -*-
" module containing class RNAsequence"
##########################################################################
from sequence import Sequence
##########################################################################
class RNAsequence(Sequence):
"""
class RNAsequence: will store information about sequences of type RNA
"""
# ------------------------------------------------------------------ #
# Constructors/Destructors #
# ------------------------------------------------------------------ #
def __init__(self):
"""__init__: the same as the mother class 'Sequence' __init__ """
Sequence.__init__(self, ID, sample, sequence)
def __del__(self):
"""__del__: not implemented """
pass
# ------------------------------------------------------------------ #
# Methods #
# ------------------------------------------------------------------ #
# public:
def translate(self):
"""translate: will transform a RNA sequence into the 6 possible protein sequences. to be implemented """
pass
def reverse_complement(self):
"""reverse_complement: To be implemented """
pass
def printSequence(self, cluster_info = False):
""" printSequence : print information about the object of type RNAsequence"""
Sequence.printSequence(self, cluster_info = False)
##########################################################################
if __name__ == '__main__':
test = RNAsequence('test_sequenc_name','test_sample','AUGCCUUGA')

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