Homec4science
Diffusion µSpectre (feat/implement_stochastic_plasticity) Browse

muSpectre/language_bindings/python/bind_py_field_collection.cc
5a823a893e5dfeat/implement_stochast…

Last Change
Raw File

bind_py_field_collection.cc
View Options

/**
* file bind_py_field_collection.cc
*
* @author Till Junge <till.junge@epfl.ch>
*
* @date 05 Jul 2018
*
* @brief Python bindings for µSpectre field collections
*
* @section LICENSE
*
* Copyright © 2018 Till Junge
*
* µSpectre is free software; you can redistribute it and/or
* modify it under the terms of the GNU Lesser General Public License as
* published by the Free Software Foundation, either version 3, or (at
* your option) any later version.
*
* µSpectre is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
* General Public License for more details.
*
* You should have received a copy of the GNU Lesser General Public License
* along with µSpectre; see the file COPYING. If not, write to the
* Free Software Foundation, Inc., 59 Temple Place - Suite 330,
* * Boston, MA 02111-1307, USA.
*
* Additional permission under GNU GPL version 3 section 7
*
* If you modify this Program, or any covered work, by linking or combining it
* with proprietary FFT implementations or numerical libraries, containing parts
* covered by the terms of those libraries' licenses, the licensors of this
* Program grant you additional permission to convey the resulting work.
*/
#include "common/common.hh"
#include "common/field.hh"
#include "common/field_collection.hh"
#include <pybind11/pybind11.h>
#include <pybind11/stl.h>
#include <pybind11/eigen.h>
#include <sstream>
#include <string>
using muSpectre::Complex;
using muSpectre::Dim_t;
using muSpectre::Int;
using muSpectre::Real;
using muSpectre::Uint;
using pybind11::literals::operator""_a;
namespace py = pybind11;
template <Dim_t Dim, class FieldCollectionDerived>
void add_field_collection(py::module & mod) {
std::stringstream name_stream{};
name_stream << "_" << (FieldCollectionDerived::Global ? "Global" : "Local")
<< "FieldCollection_" << Dim << 'd';
const auto name{name_stream.str()};
using FC_t = muSpectre::FieldCollectionBase<Dim, FieldCollectionDerived>;
py::class_<FC_t>(mod, name.c_str())
.def("get_real_field",
[](FC_t & field_collection, std::string unique_name) ->
typename FC_t::template TypedField_t<Real> & {
return field_collection.template get_typed_field<Real>(
unique_name);
},
"unique_name"_a, py::return_value_policy::reference_internal)
.def("get_int_field",
[](FC_t & field_collection, std::string unique_name) ->
typename FC_t::template TypedField_t<Int> & {
return field_collection.template get_typed_field<Int>(unique_name);
},
"unique_name"_a, py::return_value_policy::reference_internal)
.def("get_uint_field",
[](FC_t & field_collection, std::string unique_name) ->
typename FC_t::template TypedField_t<Uint> & {
return field_collection.template get_typed_field<Uint>(
unique_name);
},
"unique_name"_a, py::return_value_policy::reference_internal)
.def("get_complex_field",
[](FC_t & field_collection, std::string unique_name) ->
typename FC_t::template TypedField_t<Complex> & {
return field_collection.template get_typed_field<Complex>(
unique_name);
},
"unique_name"_a, py::return_value_policy::reference_internal)
.def("get_real_statefield",
[](FC_t & field_collection, std::string unique_name) ->
typename FC_t::template TypedStateField_t<Real> & {
return field_collection.template get_typed_statefield<Real>(
unique_name);
},
"unique_name"_a, py::return_value_policy::reference_internal)
.def("get_int_statefield",
[](FC_t & field_collection, std::string unique_name) ->
typename FC_t::template TypedStateField_t<Int> & {
return field_collection.template get_typed_statefield<Int>(
unique_name);
},
"unique_name"_a, py::return_value_policy::reference_internal)
.def("get_uint_statefield",
[](FC_t & field_collection, std::string unique_name) ->
typename FC_t::template TypedStateField_t<Uint> & {
return field_collection.template get_typed_statefield<Uint>(
unique_name);
},
"unique_name"_a, py::return_value_policy::reference_internal)
.def("get_complex_statefield",
[](FC_t & field_collection, std::string unique_name) ->
typename FC_t::template TypedStateField_t<Complex> & {
return field_collection.template get_typed_statefield<Complex>(
unique_name);
},
"unique_name"_a, py::return_value_policy::reference_internal)
.def_property_readonly(
"field_names", &FC_t::get_field_names,
"returns the names of all fields in this collection")
.def_property_readonly("statefield_names", &FC_t::get_statefield_names,
"returns the names of all state fields in this "
"collection");
}
namespace internal_fill {
/**
* Needed for static switch when adding fillers to fields (static
* switch on whether they are global). Default case is for global
* fields.
*/
template <bool IsGlobal, class Field, class PyField>
struct FillHelper {
static void add_fill(PyField & py_field) {
py_field.def(
"fill_from_local",
[](Field & field, const typename Field::LocalField_t & local) {
field.fill_from_local(local);
},
"local"_a,
"Fills the content of a local field into a global field "
"(modifies only the pixels that are not present in the "
"local field");
}
};
/**
* Specialisation for local fields
*/
template <class Field, class PyField>
struct FillHelper<false, Field, PyField> {
static void add_fill(PyField & py_field) {
py_field.def(
"fill_from_global",
[](Field & field, const typename Field::GlobalField_t & global) {
field.fill_from_global(global);
},
"global"_a,
"Fills the content of a global field into a local field.");
}
};
} // namespace internal_fill
template <typename T, class FieldCollection>
void add_field(py::module & mod, std::string dtype_name) {
using Field_t = muSpectre::TypedField<FieldCollection, T>;
std::stringstream name_stream{};
name_stream << (FieldCollection::Global ? "Global" : "Local") << "Field"
<< dtype_name << "_" << FieldCollection::spatial_dim();
std::string name{name_stream.str()};
using Ref_t = py::EigenDRef<Eigen::Matrix<T, Eigen::Dynamic, Eigen::Dynamic>>;
py::class_<Field_t, typename Field_t::Parent> py_field(mod, name.c_str());
py_field
.def_property("array", [](Field_t & field) { return field.eigen(); },
[](Field_t & field, Ref_t mat) { field.eigen() = mat; },
"array of stored data")
.def_property_readonly(
"array", [](const Field_t & field) { return field.eigen(); },
"array of stored data")
.def_property("vector", [](Field_t & field) { return field.eigenvec(); },
[](Field_t & field, Ref_t mat) { field.eigen() = mat; },
"flattened array of stored data")
.def_property_readonly(
"vector", [](const Field_t & field) { return field.eigenvec(); },
"flattened array of stored data");
using FillHelper_t = internal_fill::FillHelper<FieldCollection::Global,
Field_t, decltype(py_field)>;
FillHelper_t::add_fill(py_field);
}
template <Dim_t Dim, class FieldCollection>
void add_field_helper(py::module & mod) {
std::stringstream name_stream{};
name_stream << (FieldCollection::Global ? "Global" : "Local") << "Field"
<< "_" << Dim;
std::string name{name_stream.str()};
using Field_t = muSpectre::internal::FieldBase<FieldCollection>;
py::class_<Field_t>(mod, name.c_str())
.def_property_readonly("name", &Field_t::get_name, "field name")
.def_property_readonly("collection", &Field_t::get_collection,
"Collection containing this field")
.def_property_readonly("nb_components", &Field_t::get_nb_components,
"number of scalars stored per pixel in this field")
.def_property_readonly("stored_type",
[](const Field_t & field) {
return field.get_stored_typeid().name();
},
"fundamental type of scalars stored in this field")
.def_property_readonly("size", &Field_t::size,
"number of pixels in this field")
.def("set_zero", &Field_t::set_zero,
"Set all components in the field to zero");
add_field<Real, FieldCollection>(mod, "Real");
add_field<Int, FieldCollection>(mod, "Int");
}
template <typename T, class FieldCollection>
void add_statefield(py::module & mod, std::string dtype_name) {
using StateField_t = muSpectre::TypedStateField<FieldCollection, T>;
std::stringstream name_stream{};
name_stream << (FieldCollection::Global ? "Global" : "Local") << "StateField"
<< dtype_name << "_" << FieldCollection::spatial_dim();
std::string name{name_stream.str()};
py::class_<StateField_t, typename StateField_t::Parent>(mod, name.c_str())
.def_property_readonly("current_field", &StateField_t::get_current_field,
"returns the current field value")
.def("get_old_field", &StateField_t::get_old_field, "nb_steps_ago"_a = 1,
"returns the value this field held 'nb_steps_ago' steps ago",
py::return_value_policy::reference_internal);
}
template <Dim_t Dim, class FieldCollection>
void add_statefield_helper(py::module & mod) {
std::stringstream name_stream{};
name_stream << (FieldCollection::Global ? "Global" : "Local") << "StateField"
<< "_" << Dim;
std::string name{name_stream.str()};
using StateField_t = muSpectre::StateFieldBase<FieldCollection>;
py::class_<StateField_t>(mod, name.c_str())
.def_property_readonly("prefix", &StateField_t::get_prefix,
"state field prefix")
.def_property_readonly("collection", &StateField_t::get_collection,
"Collection containing this field")
.def_property_readonly("nb_memory", &StateField_t::get_nb_memory,
"number of old states stored")
.def_property_readonly(
"stored_type",
[](const StateField_t & field) {
return field.get_stored_typeid().name();
},
"fundamental type of scalars stored in this field");
add_statefield<Real, FieldCollection>(mod, "Real");
add_statefield<Int, FieldCollection>(mod, "Int");
}
template <Dim_t Dim>
void add_field_collection_helper(py::module & mod) {
add_field_helper<Dim, muSpectre::GlobalFieldCollection<Dim>>(mod);
add_field_helper<Dim, muSpectre::LocalFieldCollection<Dim>>(mod);
add_statefield_helper<Dim, muSpectre::GlobalFieldCollection<Dim>>(mod);
add_statefield_helper<Dim, muSpectre::LocalFieldCollection<Dim>>(mod);
add_field_collection<Dim, muSpectre::GlobalFieldCollection<Dim>>(mod);
add_field_collection<Dim, muSpectre::LocalFieldCollection<Dim>>(mod);
}
void add_field_collections(py::module & mod) {
add_field_collection_helper<muSpectre::twoD>(mod);
add_field_collection_helper<muSpectre::threeD>(mod);
}
c4science · Help