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/**
* file field.hh
*
* @author Till Junge <till.junge@epfl.ch>
*
* @date 07 Sep 2017
*
* @brief header-only implementation of a field for field collections
*
* @section LICENCE
*
* Copyright (C) 2017 Till Junge
*
* µSpectre is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3, or (at
* your option) any later version.
*
* µSpectre is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
* General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with GNU Emacs; see the file COPYING. If not, write to the
* Free Software Foundation, Inc., 59 Temple Place - Suite 330,
* Boston, MA 02111-1307, USA.
*/
#ifndef FIELD_H
#define FIELD_H
#include <string>
#include <sstream>
#include <utility>
#include <typeinfo>
#include <vector>
#include <algorithm>
#include <cmath>
#include <memory>
#include <type_traits>
#include <Eigen/Dense>
#include "common/T4_map_proxy.hh"
namespace muSpectre {
/* ---------------------------------------------------------------------- */
class FieldCollectionError: public std::runtime_error {
public:
explicit FieldCollectionError(const std::string& what)
:std::runtime_error(what){}
explicit FieldCollectionError(const char * what)
:std::runtime_error(what){}
};
class FieldError: public FieldCollectionError {
using Parent = FieldCollectionError;
public:
explicit FieldError(const std::string& what)
:Parent(what){}
explicit FieldError(const char * what)
:Parent(what){}
};
class FieldInterpretationError: public FieldError
{
public:
explicit FieldInterpretationError(const std::string & what)
:FieldError(what){}
explicit FieldInterpretationError(const char * what)
:FieldError(what){}
};
namespace internal {
/* ---------------------------------------------------------------------- */
template <class FieldCollection>
class FieldBase
{
protected:
//! constructor
//! unique name (whithin Collection)
//! number of components
//! collection to which this field belongs (eg, material, system)
FieldBase(std::string unique_name,
size_t nb_components,
FieldCollection & collection);
public:
using collection_t = FieldCollection;
//! Copy constructor
FieldBase(const FieldBase &other) = delete;
//! Move constructor
FieldBase(FieldBase &&other) noexcept = delete;
//! Destructor
virtual ~FieldBase() noexcept = default;
//! Copy assignment operator
FieldBase& operator=(const FieldBase &other) = delete;
//! Move assignment operator
FieldBase& operator=(FieldBase &&other) noexcept = delete;
/* ---------------------------------------------------------------------- */
//!Identifying accessors
//! return field name
inline const std::string & get_name() const;
//! return field type
//inline const Field_t & get_type() const;
//! return my collection (for iterating)
inline const FieldCollection & get_collection() const;
//! return my collection (for iterating)
inline const size_t & get_nb_components() const;
//! return type_id of stored type
virtual const std::type_info & get_stored_typeid() const = 0;
virtual size_t size() const = 0;
//! initialise field to zero (do more complicated initialisations through
//! fully typed maps)
virtual void set_zero() = 0;
//! give access to collections
friend FieldCollection;
friend typename FieldCollection::Parent;
protected:
/* ---------------------------------------------------------------------- */
//! allocate memory etc
virtual void resize(size_t size) = 0;
const std::string name;
const size_t nb_components;
const FieldCollection & collection;
private:
};
/* ---------------------------------------------------------------------- */
//! declaraton for friending
template <class FieldCollection, typename T, Dim_t NbComponents, bool isConst>
class FieldMap;
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t NbComponents,
bool ArrayStore=false>
class TypedFieldBase: public FieldBase<FieldCollection>
{
friend class FieldMap<FieldCollection, T, NbComponents, true>;
friend class FieldMap<FieldCollection, T, NbComponents, false>;
public:
constexpr static auto nb_components{NbComponents};
using Parent = FieldBase<FieldCollection>;
using collection_t = typename Parent::collection_t;
using Scalar = T;
using Base = Parent;
//using storage_type = Eigen::Array<T, Eigen::Dynamic, NbComponents>;
using StoredType = Eigen::Array<T, NbComponents, 1>;
using StorageType = std::conditional_t
<ArrayStore,
std::vector<StoredType,
Eigen::aligned_allocator<StoredType>>,
std::vector<T,Eigen::aligned_allocator<T>>>;
using EigenRep = Eigen::Array<T, NbComponents, Eigen::Dynamic>;
using EigenMap = std::conditional_t<
ArrayStore,
Eigen::Map<EigenRep, Eigen::Aligned,
Eigen::OuterStride<sizeof(StoredType)/sizeof(T)>>,
Eigen::Map<EigenRep>>;
using ConstEigenMap = std::conditional_t<
ArrayStore,
Eigen::Map<const EigenRep, Eigen::Aligned,
Eigen::OuterStride<sizeof(StoredType)/sizeof(T)>>,
Eigen::Map<const EigenRep>>;
TypedFieldBase(std::string unique_name,
FieldCollection& collection);
virtual ~TypedFieldBase() = default;
//! return type_id of stored type
virtual const std::type_info & get_stored_typeid() const override final;
//! initialise field to zero (do more complicated initialisations through
//! fully typed maps)
inline void set_zero() override final;
template <bool isArrayStore = ArrayStore>
inline void push_back(const
std::enable_if_t<isArrayStore, StoredType> &
value);
template <bool componentStore = !ArrayStore>
inline std::enable_if_t<componentStore> push_back(const StoredType & value);
//! Number of stored arrays (i.e. total number of stored
//! scalars/NbComponents)
size_t size() const override final;
static TypedFieldBase & check_ref(Parent & other);
static const TypedFieldBase & check_ref(const Base & parent);
inline T* data() {return this->get_ptr_to_entry(0);}
inline const T* data() const {return this->get_ptr_to_entry(0);}
inline EigenMap eigen();
inline ConstEigenMap eigen() const;
template<typename otherT>
inline Real inner_product(const TypedFieldBase<FieldCollection, otherT, NbComponents,
ArrayStore> & other) const;
protected:
template <bool isArray=ArrayStore>
inline std::enable_if_t<isArray, T*> get_ptr_to_entry(const size_t&& index);
template <bool isArray=ArrayStore>
inline std::enable_if_t<isArray, const T*>
get_ptr_to_entry(const size_t&& index) const;
template <bool noArray = !ArrayStore>
inline T* get_ptr_to_entry(std::enable_if_t<noArray, const size_t&&> index);
template <bool noArray = !ArrayStore>
inline const T*
get_ptr_to_entry(std::enable_if_t<noArray, const size_t&&> index) const;
inline virtual void resize(size_t size) override final;
StorageType values{};
};
} // internal
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t order, Dim_t dim>
class TensorField: public internal::TypedFieldBase<FieldCollection,
T,
ipow(dim,order)>
{
public:
using Parent = internal::TypedFieldBase<FieldCollection,
T,
ipow(dim,order)>;
using Base = typename Parent::Base;
using Field_p = typename FieldCollection::Field_p;
using component_type = T;
using Scalar = typename Parent::Scalar;
//! Copy constructor
TensorField(const TensorField &other) = delete;
//! Move constructor
TensorField(TensorField &&other) noexcept = delete;
//! Destructor
virtual ~TensorField() noexcept = default;
//! Copy assignment operator
TensorField& operator=(const TensorField &other) = delete;
//! Move assignment operator
TensorField& operator=(TensorField &&other) noexcept = delete;
//! accessors
inline Dim_t get_order() const;
inline Dim_t get_dim() const;
//! factory function
template<class FieldType, class CollectionType, typename... Args>
friend FieldType& make_field(std::string unique_name,
CollectionType & collection,
Args&&... args);
static TensorField & check_ref(Base & other) {
return static_cast<TensorField &>(Parent::check_ref(other));}
static const TensorField & check_ref(const Base & other) {
return static_cast<const TensorField &>(Parent::check_ref(other));}
/**
* Pure convenience functions to get a MatrixFieldMap of
* appropriate dimensions mapped to this field. You can also
* create other types of maps, as long as they have the right
* fundamental type (T) and the correct size (nbComponents).
*/
decltype(auto) get_map();
decltype(auto) get_map() const;
protected:
//! constructor protected!
TensorField(std::string unique_name, FieldCollection & collection);
private:
};
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t NbRow, Dim_t NbCol=NbRow>
class MatrixField: public internal::TypedFieldBase<FieldCollection,
T,
NbRow*NbCol>
{
public:
using Parent = internal::TypedFieldBase<FieldCollection,
T,
NbRow*NbCol>;
using Base = typename Parent::Base;
using Field_p = std::unique_ptr<internal::FieldBase<FieldCollection>>;
using component_type = T;
//! Copy constructor
MatrixField(const MatrixField &other) = delete;
//! Move constructor
MatrixField(MatrixField &&other) noexcept = delete;
//! Destructor
virtual ~MatrixField() noexcept = default;
//! Copy assignment operator
MatrixField& operator=(const MatrixField &other) = delete;
//! Move assignment operator
MatrixField& operator=(MatrixField &&other) noexcept = delete;
//! accessors
inline Dim_t get_nb_row() const;
inline Dim_t get_nb_col() const;
//! factory function
template<class FieldType, class CollectionType, typename... Args>
friend FieldType& make_field(std::string unique_name,
CollectionType & collection,
Args&&... args);
static MatrixField & check_ref(Base & other) {
return static_cast<MatrixField &>(Parent::check_ref(other));}
static const MatrixField & check_ref(const Base & other) {
return static_cast<const MatrixField &>(Parent::check_ref(other));}
decltype(auto) get_map();
decltype(auto) get_map() const;
protected:
//! constructor protected!
MatrixField(std::string unique_name, FieldCollection & collection);
private:
};
/* ---------------------------------------------------------------------- */
//! convenience alias (
template <class FieldCollection, typename T>
using ScalarField = MatrixField<FieldCollection, T, 1, 1>;
/* ---------------------------------------------------------------------- */
// Implementations
namespace internal {
/* ---------------------------------------------------------------------- */
template <class FieldCollection>
FieldBase<FieldCollection>::FieldBase(std::string unique_name,
size_t nb_components_,
FieldCollection & collection_)
:name(unique_name), nb_components(nb_components_),
collection(collection_) {}
/* ---------------------------------------------------------------------- */
template <class FieldCollection>
inline const std::string & FieldBase<FieldCollection>::get_name() const {
return this->name;
}
/* ---------------------------------------------------------------------- */
template <class FieldCollection>
inline const FieldCollection & FieldBase<FieldCollection>::
get_collection() const {
return this->collection;
}
/* ---------------------------------------------------------------------- */
template <class FieldCollection>
inline const size_t & FieldBase<FieldCollection>::
get_nb_components() const {
return this->nb_components;
}
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t NbComponents, bool ArrayStore>
TypedFieldBase<FieldCollection, T, NbComponents, ArrayStore>::
TypedFieldBase(std::string unique_name, FieldCollection & collection)
:FieldBase<FieldCollection>(unique_name, NbComponents, collection){
static_assert
((std::is_arithmetic<T>::value ||
std::is_same<T, Complex>::value),
"Use TypedFieldBase for integer, real or complex scalars for T");
static_assert(NbComponents > 0,
"Only fields with more than 0 components");
}
/* ---------------------------------------------------------------------- */
//! return type_id of stored type
template <class FieldCollection, typename T, Dim_t NbComponents, bool ArrayStore>
const std::type_info & TypedFieldBase<FieldCollection, T, NbComponents, ArrayStore>::
get_stored_typeid() const {
return typeid(T);
}
/* ---------------------------------------------------------------------- */
template<class FieldCollection, typename T, Dim_t NbComponents, bool ArrayStore>
void
TypedFieldBase<FieldCollection, T, NbComponents, ArrayStore>::
set_zero() {
std::fill(this->values.begin(), this->values.end(), T{});
}
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t NbComponents, bool ArrayStore>
size_t TypedFieldBase<FieldCollection, T, NbComponents, ArrayStore>::
size() const {
if (ArrayStore) {
return this->values.size();
} else {
return this->values.size()/NbComponents;
}
}
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t NbComponents, bool ArrayStore>
TypedFieldBase<FieldCollection, T, NbComponents, ArrayStore> &
TypedFieldBase<FieldCollection, T, NbComponents, ArrayStore>::
check_ref(Base & other) {
if (typeid(T).hash_code() != other.get_stored_typeid().hash_code()) {
std::string err ="Cannot create a Reference of requested type " +(
"for field '" + other.get_name() + "' of type '" +
other.get_stored_typeid().name() + "'");
throw std::runtime_error
(err);
}
//check size compatibility
if (NbComponents != other.get_nb_components()) {
throw std::runtime_error
("Cannot create a Reference to a field with " +
std::to_string(NbComponents) + " components " +
"for field '" + other.get_name() + "' with " +
std::to_string(other.get_nb_components()) + " components");
}
return static_cast<TypedFieldBase&>(other);
}
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t NbComponents,
bool ArrayStore>
const TypedFieldBase<FieldCollection, T, NbComponents, ArrayStore> &
TypedFieldBase<FieldCollection, T, NbComponents, ArrayStore>::
check_ref(const Base & other) {
if (typeid(T).hash_code() != other.get_stored_typeid().hash_code()) {
std::stringstream err_str{};
err_str << "Cannot create a Reference of requested type "
<< "for field '" << other.get_name() << "' of type '"
<< other.get_stored_typeid().name() << "'";
throw std::runtime_error
(err_str.str());
}
//check size compatibility
if (NbComponents != other.get_nb_components()) {
throw std::runtime_error
("Cannot create a Reference to a field with " +
std::to_string(NbComponents) + " components " +
"for field '" + other.get_name() + "' with " +
std::to_string(other.get_nb_components()) + " components");
}
return static_cast<const TypedFieldBase&>(other);
}
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t NbComponents,
bool ArrayStore>
typename TypedFieldBase<FieldCollection, T, NbComponents, ArrayStore>::EigenMap
TypedFieldBase<FieldCollection, T, NbComponents, ArrayStore>::
eigen() {
return EigenMap(this->data(), NbComponents, this->size());
}
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t NbComponents,
bool ArrayStore>
typename TypedFieldBase<FieldCollection, T, NbComponents, ArrayStore>::ConstEigenMap
TypedFieldBase<FieldCollection, T, NbComponents, ArrayStore>::
eigen() const {
return ConstEigenMap(this->data(), NbComponents, this->size());
}
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t NbComponents,
bool ArrayStore>
template<typename otherT>
Real
TypedFieldBase<FieldCollection, T, NbComponents, ArrayStore>::
inner_product(const TypedFieldBase<FieldCollection, otherT, NbComponents,
ArrayStore> & other) const {
return (this->eigen() * other.eigen()).sum();
}
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t NbComponents, bool ArrayStore>
template <bool isArray>
std::enable_if_t<isArray, T*>
TypedFieldBase<FieldCollection, T, NbComponents, ArrayStore>::
get_ptr_to_entry(const size_t&& index) {
static_assert (isArray == ArrayStore, "SFINAE");
return &this->values[std::move(index)](0, 0);
}
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t NbComponents, bool ArrayStore>
template <bool noArray>
T* TypedFieldBase<FieldCollection, T, NbComponents, ArrayStore>::
get_ptr_to_entry(std::enable_if_t<noArray, const size_t&&> index) {
static_assert (noArray != ArrayStore, "SFINAE");
return &this->values[NbComponents*std::move(index)];
}
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t NbComponents, bool ArrayStore>
template <bool isArray>
std::enable_if_t<isArray, const T*>
TypedFieldBase<FieldCollection, T, NbComponents, ArrayStore>::
get_ptr_to_entry(const size_t&& index) const {
static_assert (isArray == ArrayStore, "SFINAE");
return &this->values[std::move(index)](0, 0);
}
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t NbComponents, bool ArrayStore>
template <bool noArray>
const T* TypedFieldBase<FieldCollection, T, NbComponents, ArrayStore>::
get_ptr_to_entry(std::enable_if_t<noArray, const size_t&&> index) const {
static_assert (noArray != ArrayStore, "SFINAE");
return &this->values[NbComponents*std::move(index)];
}
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t NbComponents, bool ArrayStore>
void TypedFieldBase<FieldCollection, T, NbComponents, ArrayStore>::
resize(size_t size) {
if (ArrayStore) {
this->values.resize(size);
} else {
this->values.resize(size*NbComponents);
}
}
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t NbComponents, bool ArrayStore>
template <bool isArrayStore>
void
TypedFieldBase<FieldCollection, T, NbComponents, ArrayStore>::
push_back(const std::enable_if_t<isArrayStore,StoredType> & value) {
static_assert(isArrayStore == ArrayStore, "SFINAE");
this->values.push_back(value);
}
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t NbComponents, bool ArrayStore>
template <bool componentStore>
std::enable_if_t<componentStore>
TypedFieldBase<FieldCollection, T, NbComponents, ArrayStore>::
push_back(const StoredType & value) {
static_assert(componentStore != ArrayStore, "SFINAE");
for (Dim_t i = 0; i < NbComponents; ++i) {
this->values.push_back(value(i));
}
}
} // internal
/* ---------------------------------------------------------------------- */
//! Factory function, guarantees that only fields get created that are
//! properly registered and linked to a collection.
template<class FieldType, class FieldCollection, typename... Args>
FieldType &
make_field(std::string unique_name,
FieldCollection & collection,
Args&&... args) {
auto ptr = std::unique_ptr<FieldType>{
new FieldType(unique_name, collection, args...)};
auto& retref = *ptr;
collection.register_field(std::move(ptr));
return retref;
}
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t order, Dim_t dim>
TensorField<FieldCollection, T, order, dim>::
TensorField(std::string unique_name, FieldCollection & collection)
:Parent(unique_name, collection) {}
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t order, Dim_t dim>
Dim_t TensorField<FieldCollection, T, order, dim>::
get_order() const {
return order;
}
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t order, Dim_t dim>
Dim_t TensorField<FieldCollection, T, order, dim>::
get_dim() const {
return dim;
}
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t NbRow, Dim_t NbCol>
MatrixField<FieldCollection, T, NbRow, NbCol>::
MatrixField(std::string unique_name, FieldCollection & collection)
:Parent(unique_name, collection) {}
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t NbRow, Dim_t NbCol>
Dim_t MatrixField<FieldCollection, T, NbRow, NbCol>::
get_nb_col() const {
return NbCol;
}
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t NbRow, Dim_t NbCol>
Dim_t MatrixField<FieldCollection, T, NbRow, NbCol>::
get_nb_row() const {
return NbRow;
}
} // muSpectre
#include "common/field_map.hh"
namespace muSpectre {
namespace internal {
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, size_t order, Dim_t dim,
bool ConstMap>
struct tensor_map_type {
};
template <class FieldCollection, typename T, Dim_t dim, bool ConstMap>
struct tensor_map_type<FieldCollection, T, firstOrder, dim, ConstMap> {
using type = MatrixFieldMap<FieldCollection, T, dim, 1, ConstMap>;
};
template <class FieldCollection, typename T, Dim_t dim, bool ConstMap>
struct tensor_map_type<FieldCollection, T, secondOrder, dim, ConstMap> {
using type = MatrixFieldMap<FieldCollection, T, dim, dim, ConstMap>;
};
template <class FieldCollection, typename T, Dim_t dim, bool ConstMap>
struct tensor_map_type<FieldCollection, T, fourthOrder, dim, ConstMap> {
using type = T4MatrixFieldMap<FieldCollection, T, dim, ConstMap>;
};
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t NbRow, Dim_t NbCol,
bool ConstMap>
struct matrix_map_type {
using type =
MatrixFieldMap<FieldCollection, T, NbRow, NbCol, ConstMap>;
};
template <class FieldCollection, typename T, bool ConstMap>
struct matrix_map_type<FieldCollection, T, oneD, oneD, ConstMap> {
using type = ScalarFieldMap<FieldCollection, T, ConstMap>;
};
} // internal
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t order, Dim_t dim>
decltype(auto) TensorField<FieldCollection, T, order, dim>::
get_map() {
constexpr bool map_constness{false};
using RawMap_t =
typename internal::tensor_map_type<FieldCollection, T, order, dim,
map_constness>::type;
return RawMap_t(*this);
}
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t order, Dim_t dim>
decltype(auto) TensorField<FieldCollection, T, order, dim>::
get_map() const {
constexpr bool map_constness{true};
using RawMap_t =
typename internal::tensor_map_type<FieldCollection, T, order, dim,
map_constness>::type;
return RawMap_t(*this);
}
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t NbRow, Dim_t NbCol>
decltype(auto) MatrixField<FieldCollection, T, NbRow, NbCol>::
get_map() {
constexpr bool map_constness{false};
using RawMap_t =
typename internal::matrix_map_type<FieldCollection, T, NbRow, NbCol,
map_constness>::type;
return RawMap_t(*this);
}
/* ---------------------------------------------------------------------- */
template <class FieldCollection, typename T, Dim_t NbRow, Dim_t NbCol>
decltype(auto) MatrixField<FieldCollection, T, NbRow, NbCol>::
get_map() const {
constexpr bool map_constness{true};
using RawMap_t =
typename internal::matrix_map_type<FieldCollection, T, NbRow, NbCol,
map_constness>::type;
return RawMap_t(*this);
}
} // muSpectre
#endif /* FIELD_H */
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