Homec4science
Diffusion µSpectre (feat/octree_intersection_split_cells) Browse

muSpectre/src/common/eigen_tools.hh
0768940e9a0afeat/octree_intersectio…

Last Change
Raw File

eigen_tools.hh
View Options

/**
* @file eigen_tools.hh
*
* @author Till Junge <till.junge@epfl.ch>
*
* @date 20 Sep 2017
*
* @brief small tools to be used with Eigen
*
* Copyright © 2017 Till Junge
*
* µSpectre is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3, or (at
* your option) any later version.
*
* µSpectre is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
* General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with GNU Emacs; see the file COPYING. If not, write to the
* Free Software Foundation, Inc., 59 Temple Place - Suite 330,
* Boston, MA 02111-1307, USA.
*/
#ifndef EIGEN_TOOLS_H
#define EIGEN_TOOLS_H
#include "common/common.hh"
#include <unsupported/Eigen/CXX11/Tensor>
#include <Eigen/Dense>
#include <utility>
#include <type_traits>
namespace muSpectre {
/* ---------------------------------------------------------------------- */
namespace internal {
//! Creates a Eigen::Sizes type for a Tensor defined by an order and dim
template <Dim_t order, Dim_t dim, Dim_t... dims>
struct SizesByOrderHelper {
//! type to use
using Sizes = typename SizesByOrderHelper<order-1, dim, dim, dims...>::Sizes;
};
//! Creates a Eigen::Sizes type for a Tensor defined by an order and dim
template <Dim_t dim, Dim_t... dims>
struct SizesByOrderHelper<0, dim, dims...> {
//! type to use
using Sizes = Eigen::Sizes<dims...>;
};
} // internal
//! Creates a Eigen::Sizes type for a Tensor defined by an order and dim
template <Dim_t order, Dim_t dim>
struct SizesByOrder {
static_assert(order > 0, "works only for order greater than zero");
//! `Eigen::Sizes`
using Sizes = typename
internal::SizesByOrderHelper<order-1, dim, dim>::Sizes;
};
/* ---------------------------------------------------------------------- */
namespace internal {
/* ---------------------------------------------------------------------- */
//! Call a passed lambda with the unpacked sizes as arguments
template<Dim_t order, typename Fun_t, Dim_t dim, Dim_t ... args>
struct CallSizesHelper {
//! applies the call
static decltype(auto) call(Fun_t && fun) {
static_assert(order > 0, "can't handle empty sizes b)");
return CallSizesHelper<order-1, Fun_t, dim, dim, args...>::call
(fun);
}
};
/* ---------------------------------------------------------------------- */
template<typename Fun_t, Dim_t dim, Dim_t ... args>
//! Call a passed lambda with the unpacked sizes as arguments
struct CallSizesHelper<0, Fun_t, dim, args...> {
//! applies the call
static decltype(auto) call(Fun_t && fun) {
return fun(args...);
}
};
} // internal
/**
* takes a lambda and calls it with the proper `Eigen::Sizes`
* unpacked as arguments. Is used to call constructors of a
* `Eigen::Tensor` or map thereof in a context where the spatial
* dimension is templated
*/
template<Dim_t order, Dim_t dim, typename Fun_t>
inline decltype(auto) call_sizes(Fun_t && fun) {
static_assert(order > 1, "can't handle empty sizes");
return internal::CallSizesHelper<order-1, Fun_t, dim, dim>::
call(std::forward<Fun_t>(fun));
}
//compile-time square root
static constexpr Dim_t ct_sqrt(Dim_t res, Dim_t l, Dim_t r){
if(l == r){
return r;
} else {
const auto mid = (r + l) / 2;
if(mid * mid >= res){
return ct_sqrt(res, l, mid);
} else {
return ct_sqrt(res, mid + 1, r);
}
}
}
static constexpr Dim_t ct_sqrt(Dim_t res){
return ct_sqrt(res, 1, res);
}
namespace EigenCheck {
/**
* Structure to determine whether an expression can be evaluated
* into a `Eigen::Matrix`, `Eigen::Array`, etc. and which helps
* determine compile-time size
*/
template <class Derived>
struct is_matrix {
//! raw type for testing
using T = std::remove_reference_t<Derived>;
//! evaluated test
constexpr static bool value{std::is_same<typename Eigen::internal::traits<T>::XprKind,
Eigen::MatrixXpr>::value};
};
/**
* Helper class to check whether an `Eigen::Array` or
* `Eigen::Matrix` is statically sized
*/
template <class Derived>
struct is_fixed {
//! raw type for testing
using T = std::remove_reference_t<Derived>;
//! evaluated test
constexpr static bool value{T::SizeAtCompileTime != Eigen::Dynamic};
};
/**
* Helper class to check whether an `Eigen::Array` or `Eigen::Matrix` is a
* static-size and square.
*/
template <class Derived>
struct is_square {
//! raw type for testing
using T = std::remove_reference_t<Derived>;
//! true if the object is square and statically sized
constexpr static bool value{
(T::RowsAtCompileTime == T::ColsAtCompileTime) &&
is_fixed<T>::value};
};
/**
* computes the dimension from a second order tensor represented
* square matrix or array
*/
template <class Derived>
struct tensor_dim {
//! raw type for testing
using T = std::remove_reference_t<Derived>;
static_assert(is_matrix<T>::value, "The type of t is not understood as an Eigen::Matrix");
static_assert(is_square<T>::value, "t's matrix isn't square");
//! evaluated dimension
constexpr static Dim_t value{T::RowsAtCompileTime};
};
//! computes the dimension from a fourth order tensor represented
//! by a square matrix
template <class Derived>
struct tensor_4_dim {
//! raw type for testing
using T = std::remove_reference_t<Derived>;
static_assert(is_matrix<T>::value, "The type of t is not understood as an Eigen::Matrix");
static_assert(is_square<T>::value, "t's matrix isn't square");
//! evaluated dimension
constexpr static Dim_t value{ct_sqrt(T::RowsAtCompileTime)};
static_assert(value*value == T::RowsAtCompileTime,
"This is not a fourth-order tensor mapped on a square "
"matrix");
};
};
namespace log_comp {
template <Dim_t dim>
using Mat_t = Eigen::Matrix<Real, dim, dim>;
template <Dim_t dim>
using Vec_t = Eigen::Matrix<Real, dim, 1>;
//! This is a static implementation of the explicit determination
//! of log(Tensor) following Jog, C.S. J Elasticity (2008) 93:
//! 141. https://doi.org/10.1007/s10659-008-9169-x
/* ---------------------------------------------------------------------- */
template <Dim_t dim, Dim_t i, Dim_t j = dim-1>
struct Proj {
static inline decltype(auto) compute(const Vec_t<dim> & eigs, const Mat_t<dim> & T) {
static_assert(dim > 0, "only works for positive dimensions");
return 1./(eigs(i) -eigs(j))*(T-eigs(j)*Mat_t<dim>::Identity()) * Proj<dim, i, j-1>::compute(eigs, T);
}
};
// catch the case when there's nothing to do
template <Dim_t dim, Dim_t other>
struct Proj<dim,other,other> {
static inline decltype(auto) compute(const Vec_t<dim> & eigs, const Mat_t<dim> & T) {
static_assert(dim > 0, "only works for positive dimensions");
return Proj<dim, other, other-1>::compute(eigs, T);
}
};
// catch the normal tail case
template <Dim_t dim, Dim_t i>
struct Proj<dim,i,0> {
static constexpr Dim_t j{0};
static inline decltype(auto) compute(const Vec_t<dim> & eigs, const Mat_t<dim> & T) {
static_assert(dim > 0, "only works for positive dimensions");
return 1./(eigs(i) -eigs(j))*(T-eigs(j)*Mat_t<dim>::Identity());
}
};
// catch the tail case when the last dimension is i
template <Dim_t dim>
struct Proj<dim,0,1> {
static constexpr Dim_t i{0};
static constexpr Dim_t j{1};
static inline decltype(auto) compute(const Vec_t<dim> & eigs, const Mat_t<dim> & T) {
static_assert(dim > 0, "only works for positive dimensions");
return 1./(eigs(i) -eigs(j))*(T-eigs(j)*Mat_t<dim>::Identity());
}
};
template <>
struct Proj<1, 0, 0> {
static constexpr Dim_t dim{1};
static constexpr Dim_t i{0};
static constexpr Dim_t j{0};
static inline decltype(auto) compute(const Vec_t<dim> & /*eigs*/, const Mat_t<dim> & /*T*/) {
return Mat_t<dim>::Identity();
}
};
template <Dim_t dim, Dim_t i>
inline decltype(auto) P(const Vec_t<dim> & eigs, const Mat_t<dim> & T) {
return Proj<dim, i>::compute(eigs, T);
}
/* ---------------------------------------------------------------------- */
template <Dim_t dim, Dim_t i = dim-1>
struct Summand {
static inline decltype(auto) compute(const Vec_t<dim> & eigs, const Mat_t<dim> & T) {
return std::log(eigs(i))*P<dim, i>(eigs, T) + Summand<dim, i-1>::compute(eigs, T);
}
};
template <Dim_t dim>
struct Summand <dim, 0>{
static constexpr Dim_t i{0};
static inline decltype(auto) compute(const Vec_t<dim> & eigs, const Mat_t<dim> & T) {
return std::log(eigs(i))*P<dim, i>(eigs, T);
}
};
template <Dim_t dim>
inline decltype(auto) Sum(const Vec_t<dim> & eigs, const Mat_t<dim> & T) {
return Summand<dim>::compute(eigs, T);
}
} // log_comp
/**
* computes the matrix logarithm efficiently for dim=1, 2, or 3 for
* a diagonizable tensor. For larger tensors, better use the direct
* eigenvalue/vector computation
*/
template <Dim_t dim>
inline decltype(auto) logm(const log_comp::Mat_t<dim>& mat) {
using Mat = log_comp::Mat_t<dim>;
Eigen::SelfAdjointEigenSolver<Mat> Solver{};
Solver.computeDirect(mat, Eigen::EigenvaluesOnly);
return Mat{log_comp::Sum(Solver.eigenvalues(), mat)};
}
/**
* compute the matrix exponential. This may not be the most
* efficient way to do this
*/
template <Dim_t dim>
inline decltype(auto) expm(const log_comp::Mat_t<dim>& mat) {
using Mat = log_comp::Mat_t<dim>;
Eigen::SelfAdjointEigenSolver<Mat> Solver{};
Solver.computeDirect(mat, Eigen::ComputeEigenvectors);
Mat retval{Mat::Zero()};
for (Dim_t i = 0; i < dim; ++i) {
auto && val = Solver.eigenvalues()(i);
auto && vec = Solver.eigenvectors().col(i);
retval += std::exp(val) * vec * vec.transpose();
}
return retval;
}
} // muSpectre
#endif /* EIGEN_TOOLS_H */
c4science · Help