reformat_jaspar_2018_clustering.sh
1bfc0a93ba65master

reformat_jaspar_2018_clustering.sh
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			pwmtool_dir='scripts/pwm_tools'
			data_dir="data/pwm/jaspar_2018_clustering"


			for file_tf in $(ls $data_dir/*tf)
			do
			file_prob=$(basename $file_tf \| sed s/.tf/_prob.mat/)
			python3.6 $pwmtool_dir/extract_transfac_pwm.py -i $file_tf --norm > $data_dir/$file_prob
			done