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pom.xml
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<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
<modelVersion>4.0.0</modelVersion>
<name>SHRINE</name>
<groupId>net.shrine</groupId>
<artifactId>shrine-base</artifactId>
<packaging>pom</packaging>
<version>1.23.1.2-SNAPSHOT</version>
<!-- -->
<properties>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
<spring.version>4.2.5.RELEASE</spring.version>
<lift-version>2.6.2</lift-version> <!-- todo where do we use lift? If it's the json library, shift to json4s . Stuck on 2.6.2 due to commons/util/src/main/scala/net/shrine/serialization/JsonMarshaller.scala:21: type mismatch -->
<scala-version>2.11.8</scala-version>
<scala-major-version>2.11</scala-major-version>
<junit-version>4.12</junit-version>
<slf4j-version>1.7.22</slf4j-version>
<log4j-version>1.2.17</log4j-version> <!-- todo log4j 1 is EOL. Use something else. -->
<jersey-version>1.19</jersey-version> <!-- todo jersey moved into glassfish. Need to update all its dependencies-->
<scalatest-version>2.2.6</scalatest-version> <!-- todo can't move to 3.0.1 due to a runtime return type check -->
<scala-maven-plugin-version>3.2.2</scala-maven-plugin-version>
<squeryl-version>0.9.7</squeryl-version>
<typesafe-config-version>1.3.1</typesafe-config-version> <!-- 1.3.0 compiled with JDK 8-->
<h2-version>1.4.193</h2-version>
<easymock-version>3.4</easymock-version>
<mysql-version>5.1.40</mysql-version>
<opencsv-version>2.3</opencsv-version>
<servlet-api-version>3.0.1</servlet-api-version><!-- for tomcat 8, you can go to 3.1.0 , but need to fix /Users/david/projects/shrine-dev/apps/proxy/src/test/scala/net/shrine/proxy/ShrineProxyServletTest.scala:119: class MockHttpServletRequest needs to be abstract -->
<scallop-version>0.9.5</scallop-version><!-- Tried 1.0.0 and got compile errors todo revist next pass -->
<spray-version>1.3.4</spray-version>
<akka-version>2.4.16</akka-version><!-- 2.4.0 compiled with JDK 8 -->
<akka-testkit-version>2.4.16</akka-testkit-version>
<json4s-version>3.5.0</json4s-version>
<slick-version>3.1.1</slick-version>
<freeslick-version>3.1.1.1</freeslick-version>
<bouncy-castle-version>1.56</bouncy-castle-version>
<courier-version>0.1.3</courier-version>
<mock-javamail-version>1.9</mock-javamail-version>
<jjwt-version>0.7.0</jjwt-version>
<jtds-version>1.3.1</jtds-version>
<jawn-version>0.10.4</jawn-version>
<rapture-version>2.0.0-M7</rapture-version>
</properties>
<!-- -->
<modules>
<module>apps/meta-app</module>
<module>apps/meta-war</module>
<module>apps/dashboard-app</module>
<module>apps/dashboard-war</module>
<module>apps/steward-app</module>
<module>apps/steward-war</module>
<module>apps/proxy</module>
<module>apps/shrine-app</module>
<module>apps/war</module>
<module>qep/service</module>
<module>hub/broadcaster-aggregator</module>
<module>hub/broadcaster-service</module>
<module>adapter/adapter-api</module>
<module>adapter/adapter-service</module>
<module>hms-support</module>
<module>tools</module>
<module>commons/util</module>
<module>commons/email</module>
<module>commons/auth</module>
<module>commons/protocol-query</module>
<module>commons/data-commons</module>
<module>commons/protocol</module>
<module>commons/crypto</module>
<module>commons/client</module>
<module>commons/config</module>
<module>commons/ont-support</module>
<module>commons/test-commons</module>
<module>install</module>
<module>integration</module>
<module>shrine-webclient</module>
</modules>
<!-- -->
<build>
<pluginManagement>
<plugins>
<plugin>
<groupId>net.alchim31.maven</groupId>
<artifactId>scala-maven-plugin</artifactId>
<version>${scala-maven-plugin-version}</version>
<executions>
<!-- Allows Java and Scala code to be compiled together and call each other -->
<execution>
<id>compile</id>
<goals>
<goal>compile</goal>
</goals>
<phase>compile</phase>
</execution>
<execution>
<id>test-compile</id>
<goals>
<goal>testCompile</goal>
</goals>
<phase>test-compile</phase>
</execution>
<execution>
<phase>process-resources</phase>
<goals>
<goal>compile</goal>
</goals>
</execution>
</executions>
<configuration>
<!-- NB: recompileMode must be set to 'incremental' to get Zinc support; just
setting useZincServer to true won't do it :( -->
<recompileMode>incremental</recompileMode>
<useZincServer>true</useZincServer>
<jvmArgs>
<jvmArg>-XX:+AggressiveOpts</jvmArg>
<jvmArg>-XX:CompileThreshold=500</jvmArg>
<jvmArg>-XX:+UseFastAccessorMethods</jvmArg>
<jvmArg>-XX:+UseStringCache</jvmArg>
<jvmArg>-XX:+OptimizeStringConcat</jvmArg>
<jvmArg>-XX:+TieredCompilation</jvmArg>
<jvmArg>-XX:+UseConcMarkSweepGC</jvmArg>
<jvmArg>-XX:+DoEscapeAnalysis</jvmArg>
<jvmArg>-server</jvmArg>
<jvmArg>-Xms64m</jvmArg>
<jvmArg>-Xmx1024m</jvmArg>
<jvmArg>-XX:MaxPermSize=384m</jvmArg>
</jvmArgs>
<scalaVersion>${scala-version}</scalaVersion>
<args>
<arg>-Xcheckinit</arg>
<arg>-unchecked</arg>
<arg>-deprecation</arg>
<arg>-Xlint:adapted-args,inaccessible,infer-any,missing-interpolator,private-shadow,type-parameter-shadow,unsound-match</arg>
<!--<arg>-Xfatal-warnings</arg>-->
</args>
<source>7</source>
<target>7</target>
</configuration>
</plugin>
<plugin>
<artifactId>maven-compiler-plugin</artifactId>
<configuration>
<source>7</source>
<target>7</target>
</configuration>
</plugin>
<plugin>
<groupId>org.codehaus.mojo</groupId>
<artifactId>buildnumber-maven-plugin</artifactId>
<!-- use explicit version because 1.0-beta-4 came with borked checksums -->
<version>1.1</version>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-jar-plugin</artifactId>
<version>2.4</version>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-war-plugin</artifactId>
<version>2.1.1</version>
</plugin>
</plugins>
</pluginManagement>
<plugins>
<!-- This creates properties ${timestamp} and ${buildNumber} (the SCM
revision number) -->
<plugin>
<groupId>org.codehaus.mojo</groupId>
<artifactId>buildnumber-maven-plugin</artifactId>
<executions>
<execution>
<phase>validate</phase>
<goals>
<goal>create</goal>
</goals>
</execution>
</executions>
<configuration>
<timestampFormat>{0,date,yyyy-MM-dd HH:mm:ss}</timestampFormat>
<revisionOnScmFailure>(not available)</revisionOnScmFailure>
</configuration>
</plugin>
<!-- Add versioning information to jars and wars -->
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-jar-plugin</artifactId>
<configuration>
<archive>
<manifest>
<addDefaultImplementationEntries>true</addDefaultImplementationEntries>
</manifest>
<manifestEntries>
<SCM-Revision>${buildNumber}</SCM-Revision>
<SCM-Branch>${scmBranch}</SCM-Branch>
<buildDate>${timestamp}</buildDate>
</manifestEntries>
</archive>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-war-plugin</artifactId>
<configuration>
<archive>
<manifest>
<addDefaultImplementationEntries>true</addDefaultImplementationEntries>
</manifest>
<manifestEntries>
<SCM-Revision>${buildNumber}</SCM-Revision>
<SCM-Branch>${scmBranch}</SCM-Branch>
<buildDate>${timestamp}</buildDate>
</manifestEntries>
</archive>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.tomcat.maven</groupId>
<artifactId>tomcat7-maven-plugin</artifactId>
<version>2.2</version>
<configuration>
<useTestClasspath>true</useTestClasspath>
<systemProperties>
<shrine.steward.gruntWatch>true</shrine.steward.gruntWatch>
<shrine.steward.database.createTablesOnStart>true</shrine.steward.database.createTablesOnStart>
<shrine.dashboard.gruntWatch>true</shrine.dashboard.gruntWatch>
<shrine.dashboard.happyBaseUrl>http://shrine-dev1.catalyst:6060/shrine/rest/happy</shrine.dashboard.happyBaseUrl>
</systemProperties>
</configuration>
</plugin>
</plugins>
</build>
<!-- -->
<scm>
<developerConnection>scm:git:https://open.med.harvard.edu/stash/scm/shrine/shrine.git</developerConnection>
</scm>
<!-- -->
<repositories>
<!-- <repository> <id>CBMI-Nexus</id> <url>https://repo.open.med.harvard.edu/nexus/content/groups/public/</url>
<snapshots> <enabled>true</enabled> </snapshots> <releases> <enabled>true</enabled>
</releases> </repository> -->
</repositories>
<!-- -->
<pluginRepositories>
<pluginRepository>
<id>CBMI-Nexus</id>
<url>https://repo.open.med.harvard.edu/nexus/content/groups/public/</url>
</pluginRepository>
</pluginRepositories>
<!-- -->
<dependencyManagement>
<dependencies>
<dependency>
<groupId>com.typesafe</groupId>
<artifactId>config</artifactId>
<version>${typesafe-config-version}</version>
</dependency>
<dependency>
<groupId>log4j</groupId>
<artifactId>log4j</artifactId>
<version>${log4j-version}</version>
</dependency>
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-jdbc</artifactId>
<version>${spring.version}</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>com.h2database</groupId>
<artifactId>h2</artifactId>
<version>${h2-version}</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.easymock</groupId>
<artifactId>easymock</artifactId>
<version>${easymock-version}</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.slf4j</groupId>
<artifactId>slf4j-log4j12</artifactId>
<version>${slf4j-version}</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>mysql</groupId>
<artifactId>mysql-connector-java</artifactId>
<version>${mysql-version}</version>
</dependency>
<dependency>
<groupId>net.sf.opencsv</groupId>
<artifactId>opencsv</artifactId>
<version>${opencsv-version}</version>
</dependency>
<dependency>
<groupId>net.liftweb</groupId>
<artifactId>lift-json_${scala-major-version}</artifactId>
<version>${lift-version}</version>
</dependency>
<dependency>
<groupId>com.sun.jersey</groupId>
<artifactId>jersey-server</artifactId>
<version>${jersey-version}</version>
</dependency>
<dependency>
<groupId>com.sun.jersey</groupId>
<artifactId>jersey-servlet</artifactId>
<version>${jersey-version}</version>
</dependency>
<dependency>
<groupId>com.sun.jersey</groupId>
<artifactId>jersey-client</artifactId>
<version>${jersey-version}</version>
</dependency>
<dependency>
<groupId>org.squeryl</groupId>
<artifactId>squeryl_${scala-major-version}</artifactId>
<version>${squeryl-version}</version>
</dependency>
<dependency>
<groupId>javax.servlet</groupId>
<artifactId>javax.servlet-api</artifactId>
<version>${servlet-api-version}</version>
<scope>provided</scope>
</dependency>
<!-- https://mvnrepository.com/artifact/org.bouncycastle/bcprov-jdk15on -->
<!-- https://mvnrepository.com/artifact/org.bouncycastle/bcpkix-jdk15on -->
<dependency>
<groupId>org.bouncycastle</groupId>
<artifactId>bcpkix-jdk15on</artifactId>
<version>${bouncy-castle-version}</version>
</dependency>
</dependencies>
</dependencyManagement>
<!-- -->
<dependencies>
<dependency>
<groupId>org.scala-lang</groupId>
<artifactId>scala-library</artifactId>
<version>${scala-version}</version>
</dependency>
<dependency>
<groupId>junit</groupId>
<artifactId>junit</artifactId>
<version>${junit-version}</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.scalatest</groupId>
<artifactId>scalatest_${scala-major-version}</artifactId>
<version>${scalatest-version}</version>
<scope>test</scope>
<exclusions>
<!-- Exclude old (Scala 2.10.0) transitive dependencies -->
<exclusion>
<groupId>org.scala-lang</groupId>
<artifactId>scala-actors</artifactId>
</exclusion>
<exclusion>
<groupId>org.scala-lang</groupId>
<artifactId>scala-reflect</artifactId>
</exclusion>
</exclusions>
</dependency>
<!-- Re-add transitive dependencies for ScalaTest with up-to-date Scala
versions -->
<dependency>
<groupId>org.scala-lang</groupId>
<artifactId>scala-actors</artifactId>
<version>${scala-version}</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.scala-lang</groupId>
<artifactId>scala-reflect</artifactId>
<version>${scala-version}</version>
</dependency>
</dependencies>
<!-- -->
<distributionManagement>
<snapshotRepository>
<id>nexus</id>
<name>Nexus Repo</name>
<url>https://repo.open.med.harvard.edu/nexus/content/repositories/snapshots</url>
<uniqueVersion>false</uniqueVersion>
</snapshotRepository>
<repository>
<id>nexus</id>
<name>Nexus Repo</name>
<url>https://repo.open.med.harvard.edu/nexus/content/repositories/releases-internal</url>
</repository>
</distributionManagement>
</project>
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