submit_template.sh
363b326a5a2emaster

submit_template.sh
View Options

			#!/bin/bash

			## ====== Settings

			#SBATCH --nodes 1
			## --> nr. nodes is >1 for MPI

			## specific for GPU nodes (free account)
			_part

			#SBATCH --mem _mem
			#SBATCH --ntasks 1
			#SBATCH --cpus-per-task 1
			#SBATCH --time 24:00:00

			#SBATCH --workdir $HOME/_mydir/sbatch/workspace__model__dataset__query/output
			#SBATCH --mail-type=ALL
			#SBATCH --mail-user=roberto.castello@epfl.ch

			echo STARTING AT $(date)

			## ====== Specify here the needed modules

			module purge
			module load intel/17.0.2
			module load python/3.6.1
			module load netcdf/4.4.1.1

			## ===== Specify here the commands to execute

			## Convert the jupyter notebook in python
			#jupyter nbconvert --to=python $HOME/_mydir/_python.ipynb

			## Copying the python executable for the record
			cp $HOME/_mydir/_python.py $HOME/_mydir/sbatch/workspace__model__dataset/.

			## Run. Argument to pass (in order): data location, model name, query name, # nodes for ELM model
			python3 $HOME/_mydir/_python.py _datadir _dataset _qry _estimators _node _accel

			echo FINISHED AT $(date)