Diffusion SpecMiCP / ReactMiCP (chloride) Browse

CMakeLists.txt
82934be6a211chloride

CMakeLists.txt
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			# ReactMiCP
			# =============

			set(REACTMICP_SOLVER_DIR solver)
			set(REACTMICP_SYSTEMS_DIR systems)
			set(REACTMICP_EQUILIBRIUMCURVE equilibrium_curve)
			set(REACTMICP_IO io)

			add_custom_target(reactmicp_incl SOURCES

			${REACTMICP_SOLVER_DIR}/reactive_transport_solver_structs.hpp

			${REACTMICP_SOLVER_DIR}/staggers_base/variables_base.hpp
			${REACTMICP_SOLVER_DIR}/staggers_base/transport_stagger_base.hpp
			${REACTMICP_SOLVER_DIR}/staggers_base/chemistry_stagger_base.hpp
			${REACTMICP_SOLVER_DIR}/staggers_base/upscaling_stagger_base.hpp
			${REACTMICP_SOLVER_DIR}/staggers_base/stagger_structs.hpp
			${REACTMICP_SOLVER_DIR}/staggers_base/decl.inl
			${REACTMICP_SOLVER_DIR}/staggers_base/staggers_base.hpp


			${REACTMICP_SYSTEMS_DIR}/saturated_react/variablesfwd.hpp

			${REACTMICP_SYSTEMS_DIR}/unsaturated/types_fwd.hpp
			${REACTMICP_SYSTEMS_DIR}/unsaturated/variables_sub.hpp
			${REACTMICP_SYSTEMS_DIR}/unsaturated/variables_box.hpp
			${REACTMICP_SYSTEMS_DIR}/unsaturated/transport_constraints.hpp
			${REACTMICP_SYSTEMS_DIR}/unsaturated/fv_1dof_equation.hpp
			${REACTMICP_SYSTEMS_DIR}/unsaturated/fv_1dof_equation.inl
			)

			set(REACTMICP_LIBFILES

			${REACTMICP_EQUILIBRIUMCURVE}/chemistry.cpp
			${REACTMICP_EQUILIBRIUMCURVE}/eqcurve_extractor.cpp
			${REACTMICP_EQUILIBRIUMCURVE}/eqcurve_coupler.cpp
			${REACTMICP_EQUILIBRIUMCURVE}/eqcurve_solid_transport.cpp

			# Flexible reactive transport solver
			# ----------------------------------
			${REACTMICP_SOLVER_DIR}/reactive_transport_solver.cpp
			${REACTMICP_SOLVER_DIR}/timestepper.cpp
			${REACTMICP_SOLVER_DIR}/runner.cpp
			#
			${REACTMICP_SYSTEMS_DIR}/saturated_react/variables.cpp
			${REACTMICP_SYSTEMS_DIR}/saturated_react/transport_program.cpp
			${REACTMICP_SYSTEMS_DIR}/saturated_react/transport_stagger.cpp
			${REACTMICP_SYSTEMS_DIR}/saturated_react/equilibrium_stagger.cpp
			${REACTMICP_SYSTEMS_DIR}/saturated_react/kinetic_stagger.cpp
			${REACTMICP_SYSTEMS_DIR}/saturated_react/react_solver.cpp
			${REACTMICP_SYSTEMS_DIR}/saturated_react/init_variables.cpp
			${REACTMICP_SYSTEMS_DIR}/saturated_react/diffusive_upscaling_stagger.cpp


			${REACTMICP_SYSTEMS_DIR}/unsaturated/variables.cpp
			${REACTMICP_SYSTEMS_DIR}/unsaturated/saturation_equation.cpp
			${REACTMICP_SYSTEMS_DIR}/unsaturated/saturation_pressure_equation.cpp
			${REACTMICP_SYSTEMS_DIR}/unsaturated/pressure_equation.cpp
			${REACTMICP_SYSTEMS_DIR}/unsaturated/aqueous_equation.cpp
			${REACTMICP_SYSTEMS_DIR}/unsaturated/transport_stagger.cpp
			${REACTMICP_SYSTEMS_DIR}/unsaturated/equilibrium_stagger.cpp
			${REACTMICP_SYSTEMS_DIR}/unsaturated/variables_interface.cpp
			${REACTMICP_SYSTEMS_DIR}/unsaturated/equilibrium_constraints.cpp

			${REACTMICP_IO}/reactive_transport.cpp
			${REACTMICP_IO}/saturated_react.cpp
			${REACTMICP_IO}/configuration.cpp
			)

			# hdf5
			# -----
			if (HDF5_FOUND)
			list(APPEND REACTMICP_LIBFILES ${REACTMICP_IO}/hdf5_unsaturated.cpp)

			include_directories(${HDF5_C_INCLUDE_DIR})
			include_directories(${HDF5_CXX_INCLUDE_DIR})
			set_source_files_properties(
			${REACTMICP_IO}/hdf5_unsaturated.cpp
			PROPERTIES COMPILE_DEFINITIONS HDF5_DEFINITIONS
			)
			endif()

			set_visibility_flag(${REACTMICP_LIBFILES})
			set_pgo_flag(${REACTMICP_LIBFILES})

			if(OPENMP_FOUND)
			if(SPECMICP_USE_OPENMP)
			set_source_files_properties(${REACTMICP_SYSTEMS_DIR}/saturated_react/equilibrium_stagger.cpp
			PROPERTIES COMPILE_DEFINITIONS "SPECMICP_USE_OPENMP"
			)
			set_source_files_properties(${REACTMICP_SYSTEMS_DIR}/saturated_react/kinetic_stagger.cpp
			PROPERTIES COMPILE_DEFINITIONS "SPECMICP_USE_OPENMP"
			)
			set_source_files_properties(${REACTMICP_SYSTEMS_DIR}/unsaturated/transport_stagger.cpp
			PROPERTIES COMPILE_DEFINITIONS "SPECMICP_USE_OPENMP"
			)
			set_source_files_properties(${REACTMICP_SYSTEMS_DIR}/unsaturated/equilibrium_stagger.cpp
			PROPERTIES COMPILE_DEFINITIONS "SPECMICP_USE_OPENMP"
			)
			endif()
			endif()

			add_library(objreactmicp OBJECT ${REACTMICP_LIBFILES})
			set_property(TARGET objreactmicp PROPERTY POSITION_INDEPENDENT_CODE 1)

			add_library(reactmicp SHARED $<TARGET_OBJECTS:objreactmicp>)

			target_link_libraries(reactmicp dfpm)
			install(TARGETS reactmicp
			LIBRARY DESTINATION ${LIBRARY_INSTALL_DIR}
			)

			# include files
			# -------------

			set(REACTMICP_STAGGERBASE_INCLUDE_LIST
			${REACTMICP_SOLVER_DIR}/staggers_base/variables_base.hpp
			${REACTMICP_SOLVER_DIR}/staggers_base/transport_stagger_base.hpp
			${REACTMICP_SOLVER_DIR}/staggers_base/chemistry_stagger_base.hpp
			${REACTMICP_SOLVER_DIR}/staggers_base/upscaling_stagger_base.hpp
			${REACTMICP_SOLVER_DIR}/staggers_base/stagger_structs.hpp
			${REACTMICP_SOLVER_DIR}/staggers_base/decl.inl
			${REACTMICP_SOLVER_DIR}/staggers_base/staggers_base.hpp
			)

			set(REACTMICP_SOLVER_INCLUDE_LIST
			${REACTMICP_SOLVER_DIR}/reactive_transport_solver_structs.hpp
			${REACTMICP_SOLVER_DIR}/reactive_transport_solver.hpp
			${REACTMICP_SOLVER_DIR}/timestepper.hpp
			${REACTMICP_SOLVER_DIR}/runner.hpp
			)

			set(REACTMICP_SATURATEDREACT_INCLUDE_LIST
			${REACTMICP_SYSTEMS_DIR}/saturated_react/variablesfwd.hpp
			${REACTMICP_SYSTEMS_DIR}/saturated_react/variables.hpp
			${REACTMICP_SYSTEMS_DIR}/saturated_react/transport_program.hpp
			${REACTMICP_SYSTEMS_DIR}/saturated_react/transport_stagger.hpp
			${REACTMICP_SYSTEMS_DIR}/saturated_react/equilibrium_stagger.hpp
			${REACTMICP_SYSTEMS_DIR}/saturated_react/kinetic_stagger.hpp
			${REACTMICP_SYSTEMS_DIR}/saturated_react/react_solver.hpp
			${REACTMICP_SYSTEMS_DIR}/saturated_react/init_variables.hpp
			${REACTMICP_SYSTEMS_DIR}/saturated_react/diffusive_upscaling_stagger.hpp
			)

			set(REACTMICP_EQUILIBRIUMCURVE_INCLUDE_LIST
			${REACTMICP_EQUILIBRIUMCURVE}/chemistry.cpp
			${REACTMICP_EQUILIBRIUMCURVE}/eqcurve_extractor.cpp
			${REACTMICP_EQUILIBRIUMCURVE}/eqcurve_coupler.cpp
			${REACTMICP_EQUILIBRIUMCURVE}/eqcurve_solid_transport.cpp

			)

			set(REACTMICP_IO_INCLUDE_LIST
			io/reactive_transport.hpp
			io/saturated_react.hpp
			io/configuration.hpp
			)

			install(FILES ${REACTMICP_STAGGERBASE_INCLUDE_LIST}
			DESTINATION ${INCLUDE_INSTALL_DIR}/reactmicp/solver/staggers_base
			)
			install(FILES ${REACTMICP_SOLVER_INCLUDE_LIST}
			DESTINATION ${INCLUDE_INSTALL_DIR}/reactmicp/solver
			)
			install(FILES ${REACTMICP_SATURATEDREACT_INCLUDE_LIST}
			DESTINATION ${INCLUDE_INSTALL_DIR}/reactmicp/systems/saturated_react
			)
			install(FILES ${REACTMICP_EQUILIBRIUMCURVE_INCLUDE_LIST}
			DESTINATION ${INCLUDE_INSTALL_DIR}/reactmicp/equilibrium_curve
			)
			install(FILES ${REACTMICP_IO_INCLUDE_LIST}
			DESTINATION ${INCLUDE_INSTALL_DIR}/reactmicp/io
			)



			# static libraries
			# ----------------

			if(SPECMICP_BUILD_STATIC)
			add_library(reactmicp_static STATIC $<TARGET_OBJECTS:objreactmicp>)
			install(TARGETS reactmicp_static
			ARCHIVE DESTINATION ${STATIC_LIBRARY_INSTALL_DIR}
			)
			else()
			add_library(reactmicp_static EXCLUDE_FROM_ALL STATIC $<TARGET_OBJECTS:objreactmicp>)
			endif()

			set_target_properties(reactmicp_static PROPERTIES OUTPUT_NAME reactmicp)
			target_link_libraries(reactmicp_static dfpm_static)

specmicp/src/reactmicp/CMakeLists.txt82934be6a211chloride

CMakeLists.txtView Options

specmicp/src/reactmicp/CMakeLists.txt
82934be6a211chloride

CMakeLists.txt
View Options