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diffusive_upscaling_stagger.cpp
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rSPECMICP SpecMiCP / ReactMiCP
diffusive_upscaling_stagger.cpp
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/*-------------------------------------------------------------------------------
Copyright (c) 2015 F. Georget <fabieng@princeton.edu>, Princeton University
All rights reserved.
Redistribution and use in source and binary forms, with or without modification,
are permitted provided that the following conditions are met:
1. Redistributions of source code must retain the above copyright notice, this
list of conditions and the following disclaimer.
2. Redistributions in binary form must reproduce the above copyright notice,
this list of conditions and the following disclaimer in the documentation and/or
other materials provided with the distribution.
3. Neither the name of the copyright holder nor the names of its contributors
may be used to endorse or promote products derived from this software without
specific prior written permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR
ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON
ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
-----------------------------------------------------------------------------*/
#include "diffusive_upscaling_stagger.hpp"
#include "../../solver/staggers_base/stagger_structs.hpp"
#include "variables.hpp"
namespace
specmicp
{
namespace
reactmicp
{
namespace
systems
{
namespace
satdiff
{
void
DiffusiveUpscalingStagger
::
initialize
(
VariablesBasePtr
var
)
{
SaturatedVariablesPtr
true_var
=
cast_var_from_base
(
var
);
true_var
->
upscaling_variables
().
setZero
();
for
(
index_t
node
=
0
;
node
<
true_var
->
nb_nodes
();
++
node
)
{
upscaling_one_node
(
node
,
true_var
);
}
}
void
DiffusiveUpscalingStagger
::
initialize_timestep
(
scalar_t
dt
,
VariablesBasePtr
var
)
{
SaturatedVariablesPtr
true_var
=
cast_var_from_base
(
var
);
m_dt
=
dt
;
for
(
index_t
node
=
1
;
node
<
true_var
->
nb_nodes
();
++
node
)
{
upscaling_one_node
(
node
,
true_var
);
true_var
->
vel_porosity
(
node
)
=
0.0
;
}
}
//! This is the main function called during a timestep
StaggerReturnCode
DiffusiveUpscalingStagger
::
restart_timestep
(
VariablesBasePtr
var
)
{
SaturatedVariablesPtr
true_var
=
cast_var_from_base
(
var
);
for
(
index_t
node
=
1
;
node
<
true_var
->
nb_nodes
();
++
node
)
{
upscaling_one_node
(
node
,
true_var
);
}
return
StaggerReturnCode
::
ResidualMinimized
;
// This is the value that should be returned if everything is ok
}
void
DiffusiveUpscalingStagger
::
upscaling_one_node
(
index_t
node
,
SaturatedVariablesPtr
true_var
)
{
// AdimensionalSystemSolutionExtractor is the class to use to
// extract information from a SpecMiCP solution
// To obtain correct information the correct units must be used
AdimensionalSystemSolutionExtractor
extractor
(
true_var
->
equilibrium_solution
(
node
),
m_data
,
m_units_set
);
// We can obtain the porosity very easily :
scalar_t
porosity
=
extractor
.
porosity
();
true_var
->
vel_porosity
(
node
)
+=
(
porosity
-
true_var
->
porosity
(
node
))
/
m_dt
;
true_var
->
porosity
(
node
)
=
porosity
;
true_var
->
diffusion_coefficient
(
node
)
=
m_diffusion_law
(
node
,
true_var
);
}
scalar_t
PowerLaw
::
get_diffusion_coefficient
(
index_t
node
,
SaturatedVariablesPtr
true_var
)
{
scalar_t
tmp_1
=
true_var
->
porosity
(
node
)
-
m_param
.
porosity_res
;
scalar_t
tmp_2
=
m_param
.
porosity_0
-
m_param
.
porosity_res
;
scalar_t
res
=
tmp_1
/
tmp_2
;
tmp_1
=
std
::
pow
(
res
,
m_param
.
exponent
);
res
=
m_param
.
d_eff_0
*
tmp_1
;
return
res
;
}
diffusion_f
PowerLaw
::
get_law
()
{
return
std
::
bind
(
std
::
mem_fn
(
&
PowerLaw
::
get_diffusion_coefficient
),
this
,
std
::
placeholders
::
_1
,
std
::
placeholders
::
_2
);
}
scalar_t
CappedPowerLaw
::
get_diffusion_coefficient
(
index_t
node
,
SaturatedVariablesPtr
true_var
)
{
scalar_t
tmp_1
=
true_var
->
porosity
(
node
)
-
m_param
.
porosity_res
;
scalar_t
tmp_2
=
m_param
.
porosity_0
-
m_param
.
porosity_res
;
scalar_t
res
=
tmp_1
/
tmp_2
;
tmp_1
=
std
::
pow
(
res
,
m_param
.
exponent
);
res
=
m_param
.
d_eff_0
*
tmp_1
;
return
std
::
min
(
m_param
.
cap
,
res
);
}
diffusion_f
CappedPowerLaw
::
get_law
()
{
return
std
::
bind
(
std
::
mem_fn
(
&
CappedPowerLaw
::
get_diffusion_coefficient
),
this
,
std
::
placeholders
::
_1
,
std
::
placeholders
::
_2
);
}
}
//end namespace satdiff
}
//end namespace systems
}
//end namespace reactmicp
}
//end namespace specmicp
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