eqcurve_coupler.hpp
7a9771634f6areactivetransport

eqcurve_coupler.hpp
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			#ifndef SPECMICP_REACTMICP_EQCURVECOUPLER_HPP
			#define SPECMICP_REACTMICP_EQCURVECOUPLER_HPP

			#include "eqcurve_extractor.hpp"
			#include "dfpm/meshes/mesh1dfwd.hpp"

			#include "dfpm/1dtransport/diffusion.hpp"
			#include "dfpmsolver/parabolic_driver.hpp"

			namespace specmicp {

			namespace dfpm {
			class SaturatedDiffusion1DParameters;
			} // end namespace dfpm

			namespace reactmicp {
			namespace eqcurve {

			class EquilibriumCurveCoupler
			{
			public:
			EquilibriumCurveCoupler(Matrix& eq_curve,
			mesh::Mesh1DPtr the_mesh,
			dfpmsolver::ParabolicDriverOptions options
			);

			void run_step(scalar_t timestep);

			Vector& solid_concentrations() {return m_solid_concentrations;}
			Vector& aqueous_concentrations() {return m_aqueous_concentrations;}

			void chemistry_step();

			private:
			EquilibriumCurveExtractor m_eqcurve;

			mesh::Mesh1DPtr m_mesh;

			std::shared_ptr<dfpm::SaturatedDiffusion1DParameters> m_param;

			Vector m_aqueous_concentrations;
			Vector m_solid_concentrations;

			dfpm::SaturatedDiffusion1D m_transport_program;
			dfpmsolver::ParabolicDriver<dfpm::SaturatedDiffusion1D> m_transport_solver;
			};

			} // end namespace eqcurve
			} // end namespace reactmicp
			} // end namespace specmicp

			#endif // SPECMICP_REACTMICP_EQCURVECOUPLER_HPP