reactmicp.qsub
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	#! /bin/csh
	# This is an example of a qsub launch file for reactmicp
	# lines starting with #PBS are options for the qsub command
	# Number of nodes
	# #PBS -l nodes=1:new
	#PBS -q b64-2.6 -l nodes=1:ppn=8

	# Name of output files for std output and error;
	# if non specified defaults are <job-name>.o<job number> and <job-name>.e<job-number>
	#PBS -e reactmicp.err
	#PBS -o reactmicp.log

	############################################################
	# data to be modified by the user #
	############################################################
	# if you do not want to define a variable just comment it out
	# by putting a # in front of it
	#
	# set directory where ReactMiCP will be run
	set dir="<directory>"

	#! output log file
	set err="err_reactmicp"

	###########################################################
	#change the working directory (default is home directory)
	cd $dir

	echo "Running on host `hostname`"
	echo "time is `date`"
	echo "directory is `pwd`"
	echo "This job runs on the following processor:"
	echo "`cat $PBS_NODEFILE`"

	# Run Reactmicp on the allocated node
	/usr/bin/time <command> >& /scratch/$err
	mv /scratch/$err $dir/.