Graphkinetics
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kinetics
History Graph
History Graph
| Commit | Author | Details | Committed | ||||
|---|---|---|---|---|---|---|---|
| 9a4089e18a62 | fabien | add some simple tests for AdimKinetics, will add more in the future | Feb 11 2015 | ||||
| 8c94dee2ed89 | fabien | add a AdimensionalSolver examples / with kinetics | Feb 11 2015 | ||||
| 965036a9c569 | fabien | Add the database for the MoMas benchmark, maybe use for other test too | Feb 11 2015 | ||||
| 5b397acac2a4 | fabien | No Ca/Al/SO2 at the boundary, seems to work much better | Feb 11 2015 | ||||
| f683d9d25c24 | fabien | reduce maximum step lenght in adim tests/to match others, remove a cycling… | Feb 11 2015 | ||||
| 26182c883bf1 | fabien | improve AdimKinetic(Euler)Solver, choose DormandPrince as the ODE integrator | Feb 11 2015 | ||||
| 8ec8f50ef0fa | fabien | small corrections for the adimensional system with the new sorbed species | Feb 10 2015 | ||||
| 7ac65cc8ee32 | fabien | modification in units::convert_pressure to avoir compiler warning | Feb 10 2015 | ||||
| 1af9208c7a4c | fabien | add support for sorbed species in AdmiensionalSystem | Feb 10 2015 | ||||
| 513ba6bd0ef3 | fabien | correct jacobian for the water equation in AdimensionalSystem, fixes issue #25 | Feb 10 2015 | ||||
| 298190351669 | fabien | add support for sorped species in the database | Feb 10 2015 | ||||
| 9290bd437d11 | fabien | small enhancements of specmicp | Feb 10 2015 | ||||
| 835f7071e071 | fabien | add a boolean to check that the solution has been initialized | Feb 10 2015 | ||||
| c0917faf9b6a | fabien | allow custom initialisation | Feb 10 2015 | ||||
| a388607362fe | fabien | add kinetics solver for the AdimensionalSystem (issue #15), TO TEST | Feb 10 2015 | ||||
| a0d7a916d1a1 | fabien | remove unused struct from saturated_react | Feb 6 2015 | ||||
| 9be560f1edb0 | fabien | start updating the cython interface | Feb 6 2015 | ||||
| 9ea6b8ee2396 | fabien | update ex_reactmicp_leaching | Feb 6 2015 | ||||
| 47a6cfb7136d | fabien | correct AdimensionalSystemSolutionExtractor::log_molality_component for water | Feb 6 2015 | ||||
| 113faa16267a | fabien | add a generic Axisymmetric 1D mesh class, in process of resolving issue #13 | Feb 5 2015 | ||||
| 7a9771634f6a | fabien | update examples | Feb 4 2015 | ||||
| cd36fb74436f | fabien | correct typo in residual water in AdimensionalSystem, fixes bug #20 | Feb 3 2015 | ||||
| 86c34c364f68 | fabien | add scaling for the AdimensionalSystem, fixes issue #23 | Feb 3 2015 | ||||
| 50b53a239634 | fabien | correct pressure contribution in specmicp, fixes issue #24 | Feb 3 2015 | ||||
| c0560e3c1407 | fabien | Correct complaints of valgrind-memcheck abount non-initialized values | Jan 20 2015 | ||||
| f494edc15db3 | fabien | fixes issue #19, The desctructor of SparseSolverBase was not virtual | Jan 20 2015 | ||||
| 29b3278d5651 | fabien | fixes bug introduced by commit 64b3616, get_performance was removed from… | Jan 20 2015 | ||||
| 056dfbdf23b9 | fabien | Documentation for the adimensionalsystem and associates | Jan 20 2015 | ||||
| 64b3616eea48 | fabien | documentation and test for the MiCP solver | Jan 20 2015 | ||||
| ecc0663ea7ef | fabien | Update/improve documentation for the reactmicp::solver namespace and its members | Jan 20 2015 | ||||
| 78be35d16fbe | fabien | move test of ODEint solvers from the Cxxtest to the Catch framework, fixes… | Jan 19 2015 | ||||
| 8f33b9c54fdb | fabien | move micpsolver tests to the Catch framework, instead of the CxxTest framework | Jan 19 2015 | ||||
| a4ba90c69915 | fabien | issue #8, all tests compiles | Jan 19 2015 | ||||
| e10c1ed3491b | fabien | all the examples compile correctly | Jan 19 2015 | ||||
| 19d5b16cc3f1 | fabien | Documentation for specmicp::AdimensionalSystem | Jan 19 2015 | ||||
| 070e54dc9d24 | fabien | issue #4, change MULTILINE_CPP_BRIEF to NO in the doxygen configuration file | Jan 19 2015 | ||||
| 14f16a9d1764 | fabien | include <iostream> for the GMRES solver,m issue #17 | Jan 18 2015 | ||||
| ef2d31ec34ae | fabien | update dfpmsolver::ParabolicDriver to use the new SparseSolvers of commit… | Jan 17 2015 | ||||
| a247fbc100c4 | fabien | modify the sparse solver module to resolve issue #11 | Jan 17 2015 | ||||
| bb1015b50ad5 | fabien | Recode database test to use the Catch framework instead of CxxTest | Jan 16 2015 | ||||
| b7869e7de918 | fabien | Remove test for the OneStepImplicit saturated diffusion system | Jan 16 2015 | ||||
| b2bda1a419fd | fabien | documentation | Jan 16 2015 | ||||
| b9a808db21fb | fabien | Remove the one step reactive transport system - don't work, don't compile | Jan 16 2015 | ||||
| 4bf2553e54f6 | fabien | Improve/clean cmakelist, list requirements/options in INSTALL | Jan 16 2015 | ||||
| f22e7d5e8694 | fabien | Improve leaching example for the new reactive transport solver | Jan 16 2015 | ||||
| 9fc5d580b72b | fabien | Do not update variables if EquilibriumSolver has not converged | Jan 16 2015 | ||||
| c99feaa01903 | fabien | Prepare AdimensionalSystem environment for kinetics | Jan 15 2015 | ||||
| c4a87185190b | fabien | add member function in database::Database to keep only certain minerals (given… | Jan 15 2015 | ||||
| a3c945176de8 | fabien | Restart values for the concentration in AdimensionalSystem is now an… | Jan 15 2015 | ||||
| 7237ac8fa937 | fabien | add Leaching example for the new system/reactive transport solver | Jan 14 2015 | ||||
| d4ae324ea89d | fabien | Improvements/bug correction in the saturated react system | Jan 14 2015 | ||||
| cd1fb73b0dac | fabien | add test equilibrium stagger in the git history / small correction in… | Jan 14 2015 | ||||
| 26ecea65a83b | fabien | Add AdimensionalSystemSolutionModificator, to modify (scaling, removing solid… | Jan 14 2015 | ||||
| a3c35a95c9f4 | fabien | add test for the equilibrium stagger in saturated_react | Jan 12 2015 | ||||
| 0bedb6497e35 | fabien | add more test for saturated_react system, correct bugs | Jan 12 2015 | ||||
| 2408f52593d3 | fabien | add some tests for the saturated_react systems, more to come | Jan 12 2015 | ||||
| 1d57790e5b76 | fabien | Minor\ corrections in SaturatedReact systems | Jan 12 2015 | ||||
| 55b82d2b1e21 | fabien | A return code was missing in ReactiveTransportSolver::solve_one_iteration | Jan 12 2015 | ||||
| cefbc702655c | fabien | use correct mmember functions in assert in AdimensionalSystem | Jan 12 2015 | ||||
| 87604b01bf0d | fabien | Set the return code to the correct value if linesearch has failed in MiCPsolver | Jan 12 2015 | ||||
| 3c484d96fa9b | fabien | Start the work on the new SaturatedDiffusion systems for the new reactive… | Jan 12 2015 | ||||
| edab8e64cbc6 | fabien | Correct typo in reactmicp::solver::StaggerReturnCode | Jan 12 2015 | ||||
| 17ac62383dd7 | fabien | improve reactive transport solver | Jan 10 2015 | ||||
| 092c377c7c2a | fabien | add tests for the new flexible reactive transport solver, proof of concept | Jan 9 2015 | ||||
| 6f21451dd340 | fabien | Improve reactive transport solver | Jan 9 2015 | ||||
| a19ce13e1a11 | fabien | add foundations of the flexible reactive transport solver | Jan 9 2015 | ||||
| 2c7e1c431676 | fabien | modify examples | Jan 9 2015 | ||||
| 1bd7817be013 | fabien | update reactmicp/equilibrium_curve to agree with commit 030defd, rename BC to… | Dec 19 2014 | ||||
| c4ac2085a98f | fabien | update examples to agree with commit 030defd, rename BC to constraints in… | Dec 19 2014 | ||||
| 7dcd83852458 | fabien | update test to agree with commit 030defd, rename BC to constraints in… | Dec 19 2014 | ||||
| 030defdf3929 | fabien | rename BC to constraints in AdimensionalSystem | Dec 19 2014 | ||||
| 681e327723b8 | fabien | do not copy the solution in the solution extractor | Dec 19 2014 | ||||
| 9a702fba7e44 | fabien | update adimensional test | Dec 16 2014 | ||||
| 6dd908c529b8 | fabien | use previous flux in reactive transport - do not work | Dec 16 2014 | ||||
| 2898b6821462 | fabien | use correct density at 25C | Dec 16 2014 | ||||
| 6203177d8b3f | fabien | improve documentation of AdimensionalSystem | Dec 15 2014 | ||||
| e9c71b96d952 | fabien | add test for a saturated system | Dec 15 2014 | ||||
| 067602901bfb | fabien | add WaterEquationType to the AdimensionalSystem | Dec 15 2014 | ||||
| 2c8f021cdfeb | fabien | improve MiCPsolver, making it possible to disable condition estimation | Dec 15 2014 | ||||
| edda4626caa0 | fabien | improve test of EquilibriumCurve | Dec 12 2014 | ||||
| 4adc6181a531 | fabien | add coupler, extractor for equilibrium | Dec 12 2014 | ||||
| bde740772827 | fabien | correct size management of the array in Chemictry equilibrium curve | Dec 12 2014 | ||||
| 3a5d25312f42 | fabien | improve transport program of reactive transport | Dec 12 2014 | ||||
| e1c6af4f4f1b | fabien | improve 1D diffusion problem | Dec 12 2014 | ||||
| 2c221cb0eb9a | fabien | add member to compute volume of a cell inside an element | Dec 11 2014 | ||||
| ad85c18048cb | fabien | correct includes in dfpm/types.hpp header | Dec 11 2014 | ||||
| ca6efa1a4157 | fabien | examples forr EquilibriulCurve to reactive transport | Dec 9 2014 | ||||
| f96d0f24dfe0 | fabien | start implementation of EquilibriumCurve approad to reactive transport | Dec 9 2014 | ||||
| 44a03c6fdab1 | fabien | add specmicp/adimensional/equilibrium_curve.cpp example | Dec 9 2014 | ||||
| 8fd901c33698 | fabien | correct examples files to use the dfpm/mesh module | Dec 9 2014 | ||||
| 110e0d72687e | fabien | remove const keyword for the output member | Dec 9 2014 | ||||
| 8caac4f45779 | fabien | add src/dfpm/types.hpp in sources | Dec 9 2014 | ||||
| 44f3acfa1b25 | fabien | correct coupling, update water in speciation solver to keep saturation at 1 | Dec 9 2014 | ||||
| cc470b429ffa | fabien | start implementation of 1d diffusion | Dec 9 2014 | ||||
| f1765f058b94 | fabien | defaults value for epsilon_jacobian in src/common.hpp | Dec 9 2014 | ||||
| c3c6d4e7ad1c | fabien | correct AdimensionalSystemSolver : now, works with 2 or more non active… | Dec 9 2014 | ||||
| 481fe8a4b959 | fabien | correct AdimensionalSystemSolver : now, works with 2 or more non active… | Dec 9 2014 | ||||
| 2f7ca0ac5ea7 | fabien | add member 'get_units' in units::UnitsBaseClass | Dec 9 2014 | ||||
| 511a07d7f37c | fabien | add the dfpm module, generic finite volume module, move meshes to dfpm | Dec 7 2014 | ||||
| 88a1b28269f2 | fabien | add a thermodynamic modeling of carbonation using AdimensionalSystem | Dec 5 2014 |
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