Diffusion tamaas (master) History

tamaas/python
master1fc7644bad5254e726552be…

Jun 10 2021

cleaned up license headers
1fc7644bad52
·frerot on Jun 10 2021, 22:30.

Jun 9 2021

added more docstrings
e76bb9e66413
·frerot on Jun 9 2021, 17:26.
added docstrings to some python function bindings
1de4d8b950ca
·frerot on Jun 9 2021, 16:35.

May 28 2021

making the whole library compile with cuda
0257e3cb2f4e
·frerot on May 28 2021, 17:15.

May 7 2021

adding type annotations and using f-strings for dumpers
3557cd97a518
·frerot on May 7 2021, 04:29.

May 1 2021

using git to create tarball archive
d3dfb81c535e
·frerot on May 1 2021, 05:00.
using versionneer to manage version numbers
bb4c6112532f
·frerot on May 1 2021, 00:58.

Apr 29 2021

pretty printing secondary scons commands (tests + install)
5c88b7c45e1a
·frerot on Apr 29 2021, 17:27.

Apr 26 2021

forgot `import os`
7fc91b79d964
·frerot on Apr 26 2021, 16:33.
better handling of file descriptors in JSONDumper
287cf88791d0
·frerot on Apr 26 2021, 16:15.
marking test_epic and westergaard_multi as xfail if backend == 'tbb'
93a4d5811ae9
·frerot on Apr 26 2021, 05:22.

Apr 25 2021

testing UVW writes
3438ff37dbe4
·frerot on Apr 25 2021, 23:48.
added JSON dumping capability and fixed dump issues ∀ model types
0d37c22cb392
·frerot on Apr 25 2021, 23:37.
using pathlib instead of os.path in dumpers
a5ad130c558f
·frerot on Apr 25 2021, 19:30.

Apr 19 2021

allowing model read from HDF5 with MPI
86e5cb1e1789
·frerot on Apr 19 2021, 20:09.

Apr 17 2021

added read method to NetCDFDumper
97bffadf7b6a
·frerot on Apr 17 2021, 01:04.
added sequential read function to H5Dumper
0ba6912bc122
·frerot on Apr 17 2021, 00:21.

Apr 16 2021

added read method to FieldDumper (raises RuntimeError)
0fad580005ff
·frerot on Apr 16 2021, 23:04.
added read() method to NumpyDumper
da270d6f9606
·frerot on Apr 16 2021, 22:55.

Apr 6 2021

corrected description of `tamaas` command
d088bf7abd63
·frerot on Apr 6 2021, 20:39.
writing surface info in text header instead of numpy file
b4d5adb73bc8
·frerot on Apr 6 2021, 20:32.
added dump option to `surface` command
67d6e4dc8646
·frerot on Apr 6 2021, 18:12.

Apr 5 2021

silencing warning about missing uvw package
9c33983aed18
·frerot on Apr 5 2021, 17:17.

Apr 2 2021

[doc] changing man section number to 7
b19adf7440cd
·frerot on Apr 2 2021, 21:53.
added an entry point `tamaas` with three sub-commands
6a713f330f44
·frerot on Apr 2 2021, 17:19.

Mar 20 2021

[doc] silencing warnings when generating documentation
6c56b69be4a2
·frerot on Mar 20 2021, 00:57.

Mar 15 2021

using SCons File and Dir instead of os.path functions
8ea64976e79c
·frerot on Mar 15 2021, 01:19.

Mar 14 2021

avoid using main_env in SConscripts
70977949d1a6
·frerot on Mar 14 2021, 04:34.

Mar 13 2021

added binder badge to setup.py for PyPI
93218b972dd2
·frerot on Mar 13 2021, 19:56.
not importing uvw.parallel in UVWDumper
db2125bf48ed
·frerot on Mar 13 2021, 01:11.

Mar 12 2021

announcing removal of python 2
4201535ed684
·frerot on Mar 12 2021, 21:04.
added references to the CHANGELOG in documentation
f4a28900a4b4
·frerot on Mar 12 2021, 17:46.

Jan 14 2021

setup netcdf dumper for parallel writes
46db5babbf1a
·frerot on Jan 14 2021, 23:41.

Jan 7 2021

stopped using leading and trailing __ in header guards
2b523bbf68a7
·frerot on Jan 7 2021, 02:54.
Merge branch 'deprecated_bindings'
10e17acc88ce
·frerot on Jan 7 2021, 01:58.
unnecessary return type on lambda
d20839711fb3
·frerot on Jan 7 2021, 01:42.
removed all legacy code
8b01fcdb4d21
·frerot on Jan 7 2021, 01:32.
deprecated old bindings
dd37e82c03d3
·frerot on Jan 7 2021, 01:28.

Jan 5 2021

added traction and displacement properties to model bindings
74509e1d1987
·frerot on Jan 5 2021, 18:13.
modified dumpers for new interface
9054b97f8b37
·frerot on Jan 5 2021, 00:06.

Jan 1 2021

copyright year 2021
2316c9ebcdd7
·frerot on Jan 1 2021, 07:47.

Dec 31 2020

added __call__ to IntegralOperator bindings
49155381f7a4
·frerot on Dec 31 2020, 04:51.
adding a constructor with global shape to surface generators
560001b7e019
·frerot on Dec 31 2020, 02:28.
more pythonic bindings of surface generators, solvers and flood fill
9d2cf7093171
·frerot on Dec 31 2020, 01:26.

Dec 30 2020

more pythonic interface for accessing integral operators
cfbbd07ff0cf
·frerot on Dec 30 2020, 23:02.

Dec 10 2020

added documentation on MPI
92343fd27ef3
·frerot on Dec 10 2020, 22:04.

Dec 9 2020

updated stress example to run with mpi
73a8b44d38ce
·frerot on Dec 9 2020, 23:20.

Dec 8 2020

protecting mkdir in @directory_dump
695f2e0111b0
·frerot on Dec 8 2020, 22:18.
added readonly properties to python model bindings
74402ed7185c
·frerot on Dec 8 2020, 21:47.
converting only dumped fields in hdf5toVTK
eed5bd5407de
·frerot on Dec 8 2020, 21:45.
added helper function to convert hdf5 model dump to VTK
6f1bb5d3d5ce
·frerot on Dec 8 2020, 19:45.
raising exception if scipy solvers are used with MPI
f739905b88d2
·frerot on Dec 8 2020, 17:04.
use uvw.RectilinearGrid instead of parallel variant
09b1019f9242
·frerot on Dec 8 2020, 17:03.

Dec 7 2020

adding has_mpi to TamaasInfo class
09634dfd5d9d
·frerot on Dec 7 2020, 18:06.

Dec 4 2020

raising when NumpyDumper is called in parallel
1af5c7f89584
·frerot on Dec 4 2020, 22:28.
prepared implementation of parallel dumpers
a9371b17cdd2
·frerot on Dec 4 2020, 22:23.
added type traits to python interface
b4ec536528a2
·frerot on Dec 4 2020, 19:59.

Dec 2 2020

added convenience size/rank to mpi bindings
cce181f1da1f
·frerot on Dec 2 2020, 00:07.

Dec 1 2020

moved mpi function bindings to their own submodule
f9fadc483c40
·frerot on Dec 1 2020, 21:44.
added wrapping of local_{size,offset} partitioner functions
3503d740b538
·frerot on Dec 1 2020, 21:13.

Nov 25 2020

Merge branch 'feature/mpi_fft_engine'
fdea6b4ef4a4
·frerot on Nov 25 2020, 21:35.

Oct 23 2020

added a function to compute deviatoric of sym tensor fields
54aab33e784a
·frerot on Oct 23 2020, 21:58.

Sep 1 2020

Merge branch 'master' into feature/mpi_fft_engine
ddb30ba41df9
·frerot on Sep 1 2020, 23:22.

Aug 13 2020

added helper method to compute (corrected) contact areas
c9eb34ff4665
·frerot on Aug 13 2020, 17:15.

Aug 8 2020

changes to setup.py to build python 2 wheels
f59e8b7c2de2
·frerot on Aug 8 2020, 00:16.

Aug 7 2020

fixing errors for python 2
69c13358055d
·frerot on Aug 7 2020, 22:56.
making sure libTamaas is linked first
87df0438ac11
·frerot on Aug 7 2020, 20:21.

Aug 5 2020

overwrite netcdf file on first dump
87299a2f0e72
·frerot on Aug 5 2020, 20:36.
creating variables with right dimensions in netcdf dumper
555b9d18b1d5
·frerot on Aug 5 2020, 20:27.

Aug 4 2020

netcdf dumper now writes frames to a single file
357aabe906d0
·frerot on Aug 4 2020, 23:02.

Aug 3 2020

Merge branch 'feature/dfsane'
0aff1cd1a985
·frerot on Aug 3 2020, 21:28.
allowing the use of ToleranceManager on C++ solvers
03fcf739ce5a
·frerot on Aug 3 2020, 21:20.
tested implementation of C++ DFSANESolver
510fc333cb53
·frerot on Aug 3 2020, 19:41.

Aug 2 2020

allowing compilation without OpenMP
d6d8134e1bba
·frerot on Aug 2 2020, 02:07.

Jul 29 2020

avoiding circular imports
8db558711c4c
·frerot on Jul 29 2020, 18:31.
renamed packaging_setup option to build_static_lib
cbe79569b127
·frerot on Jul 29 2020, 16:29.
packaging setup now generates static libTamaas
77e32d9a06e7
·frerot on Jul 29 2020, 03:21.

Jul 28 2020

[DOC] uniformizing titles and descriptions of Tamaas
4fe90e4e93ed
·frerot on Jul 28 2020, 16:16.
[DOC] adding various badges
5834c8d64134
·frerot on Jul 28 2020, 15:53.

Jul 27 2020

wrapping version number in python
90ef0739a009
·tag: v2.1.3
·frerot on Jul 27 2020, 18:03.

Jul 24 2020

modifiying python install scripts for a PyPI tamaas package
0f1bae08aea7
·tag: v2.1.2
·frerot on Jul 24 2020, 21:13.

Jul 22 2020

not flattening arrays in netcdf dumper
af08c7abcf2c
·frerot on Jul 22 2020, 14:02.

Jul 12 2020

fixing sequential context manager
6f8537513eca
·frerot on Jul 12 2020, 17:24.
added mpi4py as dependency
0c9ddfa242f4
·frerot on Jul 12 2020, 03:59.
added a sequential context manager
ea6e316a0703
·frerot on Jul 12 2020, 01:30.

Jul 11 2020

mirroring logger behavior with MPI for python wrapper
1785d820392d
·frerot on Jul 11 2020, 00:28.

Jul 10 2020

Merge branch 'master' into feature/mpi_fft_engine
0defcff64961
·frerot on Jul 10 2020, 23:59.
redirecting iostreams to python streams for solve functions
6124726e1b08
·frerot on Jul 10 2020, 23:27.
using std::shared_ptr<Functional> as holder type for functionals
aba0a246fdf6
·frerot on Jul 10 2020, 18:04.

Jul 6 2020

tentative implementation of surface generation with mpi
5b293e6eba23
·frerot on Jul 6 2020, 04:17.

Jul 3 2020

setting proper rpath for tests
f16ec5b85e49
·frerot on Jul 3 2020, 04:53.

Jul 2 2020

forcing update with pip on scons install call
14b215073440
·frerot on Jul 2 2020, 21:19.

Jun 25 2020

added access to yield stress and hardening modulus in residual
7dbb2d1099f2
·frerot on Jun 25 2020, 16:42.

Jun 24 2020

cleaning up the use of preprocessor macros
3cc1d8a160a7
·frerot on Jun 24 2020, 05:07.

Jun 18 2020

added __contains__ and __iter__ to model bindings
2c3c3ddadf5a
·frerot on Jun 18 2020, 16:23.

Jun 12 2020

fixing recursion issue with ToleranceManager
ff710f40e7e3
·frerot on Jun 12 2020, 01:06.

Jun 11 2020

added compression to UVW dumper
e8c4a114f2ec
·frerot on Jun 11 2020, 20:06.

Jun 9 2020

added a group dumper for paraview data
ace594b68267
·frerot on Jun 9 2020, 21:04.

Jun 8 2020

writing solver infos to stderr
58fde8ae6754
·frerot on Jun 8 2020, 23:42.
simplified helpers in dumpers
022385d24743
·frerot on Jun 8 2020, 23:42.