deltaNotch4.hpp
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deltaNotch4.hpp
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			#ifndef __DELTANOTCH4_HPP__
			#define __DELTANOTCH4_HPP__
			//#include <boost/numeric/odeint.hpp>
			#include "deltaNotch2.hpp"


			class DeltaNotch4 : public DeltaNotch2{
			protected:
			double dem_diffu; // delta diffusion constant in the extracellular matrix
			double kdep; //membrane attachment rate
			double kdem;//membrane detachment rate
			// double dl; //delta leakage rate (exocytosis)

			struct visitorParamsExt: public DeltaNotch2::visitorParams{
			Lattice *lat;
			visitorParamsExt(uint c, DeltaNotch2 d, Lattice *l):
			DeltaNotch2::visitorParams(c,d){lat=l;}
			};

			public:
			DeltaNotch4():DeltaNotch2(){}
			virtual ~DeltaNotch4(){}
			virtual void setDefaultParameters(){
			DeltaNotch2::setDefaultParameters();
			dem_diffu= 0.5;
			kdep = 2;
			kdem = 10;//10;
			gd = 1;
			ktp = 10;
			kcp = 2;
			dprod = 5;
			// ks =0;
			}
			void operator() (const state_type &y , state_type &dydt , const double t);
			void setDeltaDiffusion(double r){dem_diffu=r;}
			void setECDeltaMembraneBindingRate(double r){kdep=r;}
			void setECDeltaMembranceUnbindingRate(double r){kdem=r;}

			virtual uint setStateVectorIndex();

			virtual uint extraCellStateDim(){return 1;}
			static void initCellState(Cell ce, void pt){DeltaNotch2::initCellState(ce, pt);}
			static void initBoundaryState(Boundary bo, void pt);
			static void setCellIndex(Cell ce, void pt) {DeltaNotch2::setCellIndex(ce, pt);}
			static void setBoundaryIndex(Boundary bo, void pt);

			};


			#endif