= Scripts =
[[http://imagej.github.io/presentations/2015-09-04-imagej2-scripting/#/| Course on ImageJ 2 Scripts]]
= Ops =
On the forum, people are interested in creating ImageJ Ops for colocalization, which would be very useful... Here I will document my attempts at creating an OP, because using JACoP Tools is becoming a nightmare.
= Duplicating an Existing Project with IntelliJ =
Have your base project open.
From the project use {nav Right-Click > Refactor > Copy... }
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Give it a new name and select the **Parent Directory**
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IntelliJ creates it but does not open it automatically
Go to nav{File > Open...}
Select the folder with your new project, here `new-project`
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== Changes to reflect the new project properties ==
=== In the POM ===
To reflect the new project. Important fields are
# `artifactId`,
# `name`
# `description`
# `main-class` (in the `properties` tag)
=== In the {nav File > Project Structure...} ===
You can change the following things
`Project Name`
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`Module Name` under **Modules**
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=== The actual Java Class ===
Navigate to one of the Java Classes in your new project and hit
{nav Right-click > Refactor > Rename...}
And rename it to reflect your new project.
== Nice things to have ==
If you want to have your resulting JAR and dependencies copied to a Fiji subdirectory when you hit **install**
You need to add this in your POM under the `<Properties>` tag
`<scijava.app.subdirectory>plugins/MyFolder</scijava.app.subdirectory>`
For this to work, and according to best practices, you need to create a `settings.xml` file in your `$HOME/.m2/` folder.
The file does not exist initially, so you should create it and then add the following.
```
<settings>
<profiles>
<profile>
<id>imagej</id>
<activation>
<file>
<exists>C:/Fiji-Dev/</exists>
</file>
</activation>
<properties>
<scijava.app.directory>C:/Fiji-Dev/</scijava.app.directory>
<delete.other.versions>true</delete.other.versions>
</properties>
</profile>
</profiles>
</settings>
```
(This will now be applied to all your projects involving ImageJ)
Change the location of the Fiji installation (here `C:/Fiji-Dev/`)