All our Documented Software is in the below hierarchy.
== Software Installed on BIOP PCs ==
| Software | Link
| ---------- | ---- |
| Arivis | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\Arivis Vision4D`
| BIOP User Tracker | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\BIOP User Tracker\Current`
| CellProfiler | https://cellprofiler.org/releases and https://cellprofileranalyst.org/releases
| Fiji | https://fiji.sc/
| Handbrake | https://handbrake.fr/downloads.php
| Harmony | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\Harmony`
| Imaris | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\Imaris`
| LAS X | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\Leica LAS`
| Matlab | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\Matlab`
| Miniconda | https://docs.conda.io/en/latest/miniconda.html **Get Python3 x64**
| Putty | https://www.chiark.greenend.org.uk/~sgtatham/putty/latest.html
| QuPath | https://qupath.github.io/
| R Studio | https://rstudio.com/products/rstudio/download/ and https://stat.ethz.ch/CRAN/
| ZEN | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\Zeiss ZEN`
For Fiji and QuPath, you can use the install script in the following repo: https://github.com/BIOP/biop-bash-scripts