(IMPORTANT) BIOP is recommending you to make publicly available your Image Processing and Analysis workflow with the corresponding imagedataset (or at least minimal example dataset)
To do so, please make publicly available:
- the dataset (or at least a part of it, eg the images used in one of the figures),
- the script(s)
- a brief description of the **Image Processing and Analysis Workflow** (we'll provide one for the scripts we made for you)
Several platforms exist, please check the //"non-exhaustive//" list below and do not hesitate to [[ https://www.epfl.ch/research/facilities/ptbiop/staff/ | contact us ]].
= Sharing Data of a Publication =
| Platform | Size Limit per Dataset| Increase the limit | Preview of Files | Example | Conditions in brief |
| [[ https://zenodo.org/ | zenodo]]| 50 Go | contact them | Preview of pdf files | [[ https://zenodo.org/record/4058414#.X6PcBkeSmUk | DEVILS dataset ]] | |
| [[ https://figshare.com/ | figshare]] | 20 Go | with fees | ? | ? | |
| [[ https://idr.openmicroscopy.org/ | idr ]]| 1000Go | contact them | images can be explored via Omero| [[ https://idr.openmicroscopy.org/search/?query=Name:idr0061 | Time-lapse ]] from [[https://www.nature.com/articles/s41467-019-10446-z#MOESM4 | Wolf et al. 2019 ]] | Complete datasets - not just images supporting one figure in the publication , preferably CC-BY licence , [[ https://idr.openmicroscopy.org/about/submission.html | see more about submission]]|
== Zenodo ==
{F15524715, size=full}
== IDR ==
{F15524836,size=full}
explore the dataset online
{F15524851,size=full}
= Sharing Data before publication =