Page Menu
Home
c4science
Search
Configure Global Search
Log In
Files
F107393369
dihedral_fourier.html
No One
Temporary
Actions
Download File
Edit File
Delete File
View Transforms
Subscribe
Mute Notifications
Award Token
Subscribers
None
File Metadata
Details
File Info
Storage
Attached
Created
Mon, Apr 7, 19:01
Size
8 KB
Mime Type
text/html
Expires
Wed, Apr 9, 19:01 (10 h, 33 m)
Engine
blob
Format
Raw Data
Handle
25379157
Attached To
rLAMMPS lammps
dihedral_fourier.html
View Options
<!DOCTYPE html>
<!--[if IE 8]><html class="no-js lt-ie9" lang="en" > <![endif]-->
<!--[if gt IE 8]><!-->
<html
class=
"no-js"
lang=
"en"
>
<!--<![endif]-->
<head>
<meta
charset=
"utf-8"
>
<meta
name=
"viewport"
content=
"width=device-width, initial-scale=1.0"
>
<title>
dihedral_style fourier command
—
LAMMPS documentation
</title>
<link
rel=
"stylesheet"
href=
"_static/css/theme.css"
type=
"text/css"
/>
<link
rel=
"stylesheet"
href=
"_static/sphinxcontrib-images/LightBox2/lightbox2/css/lightbox.css"
type=
"text/css"
/>
<link
rel=
"top"
title=
"LAMMPS documentation"
href=
"index.html"
/>
<script
src=
"_static/js/modernizr.min.js"
></script>
</head>
<body
class=
"wy-body-for-nav"
role=
"document"
>
<div
class=
"wy-grid-for-nav"
>
<nav
data-toggle=
"wy-nav-shift"
class=
"wy-nav-side"
>
<div
class=
"wy-side-nav-search"
>
<a
href=
"Manual.html"
class=
"icon icon-home"
>
LAMMPS
</a>
<div
role=
"search"
>
<form
id=
"rtd-search-form"
class=
"wy-form"
action=
"search.html"
method=
"get"
>
<input
type=
"text"
name=
"q"
placeholder=
"Search docs"
/>
<input
type=
"hidden"
name=
"check_keywords"
value=
"yes"
/>
<input
type=
"hidden"
name=
"area"
value=
"default"
/>
</form>
</div>
</div>
<div
class=
"wy-menu wy-menu-vertical"
data-spy=
"affix"
role=
"navigation"
aria-label=
"main navigation"
>
<!-- Local TOC -->
<div
class=
"local-toc"
><ul>
<li><a
class=
"reference internal"
href=
"#"
>
dihedral_style fourier command
</a></li>
<li><a
class=
"reference internal"
href=
"#dihedral-style-fourier-omp-command"
>
dihedral_style fourier/omp command
</a><ul>
<li><a
class=
"reference internal"
href=
"#syntax"
>
Syntax
</a></li>
<li><a
class=
"reference internal"
href=
"#examples"
>
Examples
</a></li>
<li><a
class=
"reference internal"
href=
"#description"
>
Description
</a></li>
<li><a
class=
"reference internal"
href=
"#restrictions"
>
Restrictions
</a></li>
<li><a
class=
"reference internal"
href=
"#related-commands"
>
Related commands
</a></li>
</ul>
</li>
</ul>
</div>
</div>
</nav>
<section
data-toggle=
"wy-nav-shift"
class=
"wy-nav-content-wrap"
>
<nav
class=
"wy-nav-top"
role=
"navigation"
aria-label=
"top navigation"
>
<i
data-toggle=
"wy-nav-top"
class=
"fa fa-bars"
></i>
<a
href=
"Manual.html"
>
LAMMPS
</a>
</nav>
<div
class=
"wy-nav-content"
>
<div
class=
"rst-content"
>
<div
role=
"navigation"
aria-label=
"breadcrumbs navigation"
>
<ul
class=
"wy-breadcrumbs"
>
<li><a
href=
"Manual.html"
>
Docs
</a>
»
</li>
<li>
dihedral_style fourier command
</li>
<li
class=
"wy-breadcrumbs-aside"
>
<a
href=
"http://lammps.sandia.gov"
>
Website
</a>
<a
href=
"Section_commands.html#comm"
>
Commands
</a>
</li>
</ul>
<hr/>
</div>
<div
role=
"main"
class=
"document"
itemscope=
"itemscope"
itemtype=
"http://schema.org/Article"
>
<div
itemprop=
"articleBody"
>
<div
class=
"section"
id=
"dihedral-style-fourier-command"
>
<span
id=
"index-0"
></span><h1>
dihedral_style fourier command
</h1>
</div>
<div
class=
"section"
id=
"dihedral-style-fourier-omp-command"
>
<h1>
dihedral_style fourier/omp command
</h1>
<div
class=
"section"
id=
"syntax"
>
<h2>
Syntax
</h2>
<div
class=
"highlight-default"
><div
class=
"highlight"
><pre><span></span><span
class=
"n"
>
dihedral_style
</span>
<span
class=
"n"
>
fourier
</span>
</pre></div>
</div>
</div>
<div
class=
"section"
id=
"examples"
>
<h2>
Examples
</h2>
<div
class=
"highlight-default"
><div
class=
"highlight"
><pre><span></span><span
class=
"n"
>
dihedral_style
</span>
<span
class=
"n"
>
fourier
</span>
<span
class=
"n"
>
dihedral_coeff
</span>
<span
class=
"mi"
>
1
</span>
<span
class=
"mi"
>
3
</span>
<span
class=
"o"
>
-
</span><span
class=
"mf"
>
0.846200
</span>
<span
class=
"mi"
>
3
</span>
<span
class=
"mf"
>
0.0
</span>
<span
class=
"mf"
>
7.578800
</span>
<span
class=
"mi"
>
1
</span>
<span
class=
"mi"
>
0
</span>
<span
class=
"mf"
>
0.138000
</span>
<span
class=
"mi"
>
2
</span>
<span
class=
"o"
>
-
</span><span
class=
"mf"
>
180.0
</span>
</pre></div>
</div>
</div>
<div
class=
"section"
id=
"description"
>
<h2>
Description
</h2>
<p>
The
<em>
fourier
</em>
dihedral style uses the potential:
</p>
<img
alt=
"_images/dihedral_fourier.jpg"
class=
"align-center"
src=
"_images/dihedral_fourier.jpg"
/>
<p>
The following coefficients must be defined for each dihedral type via the
<a
class=
"reference internal"
href=
"dihedral_coeff.html"
><span
class=
"doc"
>
dihedral_coeff
</span></a>
command as in the example above, or in
the data file or restart files read by the
<a
class=
"reference internal"
href=
"read_data.html"
><span
class=
"doc"
>
read_data
</span></a>
or
<a
class=
"reference internal"
href=
"read_restart.html"
><span
class=
"doc"
>
read_restart
</span></a>
commands:
</p>
<ul
class=
"simple"
>
<li>
m (integer
>
=1)
</li>
<li>
K1 (energy)
</li>
<li>
n1 (integer
>
= 0)
</li>
<li>
d1 (degrees)
</li>
<li></li>
<li>
Km (energy)
</li>
<li>
nm (integer
>
= 0)
</li>
<li>
dm (degrees)
</li>
</ul>
<hr
class=
"docutils"
/>
<p>
Styles with a
<em>
gpu
</em>
,
<em>
intel
</em>
,
<em>
kk
</em>
,
<em>
omp
</em>
, or
<em>
opt
</em>
suffix are
functionally the same as the corresponding style without the suffix.
They have been optimized to run faster, depending on your available
hardware, as discussed in
<a
class=
"reference internal"
href=
"Section_accelerate.html"
><span
class=
"doc"
>
Section_accelerate
</span></a>
of the manual. The accelerated styles take the same arguments and
should produce the same results, except for round-off and precision
issues.
</p>
<p>
These accelerated styles are part of the GPU, USER-INTEL, KOKKOS,
USER-OMP and OPT packages, respectively. They are only enabled if
LAMMPS was built with those packages. See the
<span
class=
"xref std std-ref"
>
Making LAMMPS
</span>
section for more info.
</p>
<p>
You can specify the accelerated styles explicitly in your input script
by including their suffix, or you can use the
<span
class=
"xref std std-ref"
>
-suffix command-line switch
</span>
when you invoke LAMMPS, or you can
use the
<a
class=
"reference internal"
href=
"suffix.html"
><span
class=
"doc"
>
suffix
</span></a>
command in your input script.
</p>
<p>
See
<a
class=
"reference internal"
href=
"Section_accelerate.html"
><span
class=
"doc"
>
Section_accelerate
</span></a>
of the manual for
more instructions on how to use the accelerated styles effectively.
</p>
</div>
<hr
class=
"docutils"
/>
<div
class=
"section"
id=
"restrictions"
>
<h2>
Restrictions
</h2>
<p>
This angle style can only be used if LAMMPS was built with the
USER_MISC package. See the
<span
class=
"xref std std-ref"
>
Making LAMMPS
</span>
section for more info on packages.
</p>
</div>
<div
class=
"section"
id=
"related-commands"
>
<h2>
Related commands
</h2>
<p><a
class=
"reference internal"
href=
"dihedral_coeff.html"
><span
class=
"doc"
>
dihedral_coeff
</span></a></p>
<p><strong>
Default:
</strong>
none
</p>
</div>
</div>
</div>
</div>
<footer>
<hr/>
<div
role=
"contentinfo"
>
<p>
©
Copyright 2013 Sandia Corporation.
</p>
</div>
Built with
<a
href=
"http://sphinx-doc.org/"
>
Sphinx
</a>
using a
<a
href=
"https://github.com/snide/sphinx_rtd_theme"
>
theme
</a>
provided by
<a
href=
"https://readthedocs.org"
>
Read the Docs
</a>
.
</footer>
</div>
</div>
</section>
</div>
<script
type=
"text/javascript"
>
var
DOCUMENTATION_OPTIONS
=
{
URL_ROOT
:
'./'
,
VERSION
:
''
,
COLLAPSE_INDEX
:
false
,
FILE_SUFFIX
:
'.html'
,
HAS_SOURCE
:
true
};
</script>
<script
type=
"text/javascript"
src=
"_static/jquery.js"
></script>
<script
type=
"text/javascript"
src=
"_static/underscore.js"
></script>
<script
type=
"text/javascript"
src=
"_static/doctools.js"
></script>
<script
type=
"text/javascript"
src=
"https://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"
></script>
<script
type=
"text/javascript"
src=
"_static/sphinxcontrib-images/LightBox2/lightbox2/js/jquery-1.11.0.min.js"
></script>
<script
type=
"text/javascript"
src=
"_static/sphinxcontrib-images/LightBox2/lightbox2/js/lightbox.min.js"
></script>
<script
type=
"text/javascript"
src=
"_static/sphinxcontrib-images/LightBox2/lightbox2-customize/jquery-noconflict.js"
></script>
<script
type=
"text/javascript"
src=
"_static/js/theme.js"
></script>
<script
type=
"text/javascript"
>
jQuery
(
function
()
{
SphinxRtdTheme
.
StickyNav
.
enable
();
});
</script>
</body>
</html>
Event Timeline
Log In to Comment