getAnnotations.php
No OneTemporary
Actions

Subscribers

None

File Metadata

	<?php

	//echo "Connecting ... <br>";
	$conn = pg_connect("host=localhost port=5432 dbname=i2b2 user=postgres password=admin");

	if (!$conn) {
	echo "Error while connecting to the postgres database";
	exit;
	}

	// just get the first row (which already contain all the annotations' name)
	$result = pg_query($conn, "SELECT annotation_id FROM shrine_ont.genomic_annotations_metadata");
	if (!$result) {
	echo "An error occurred.\n";
	exit;
	}

	// json format
	$annotationNames = "[";
	while ($row = pg_fetch_row($result)) {
	$annotationNames .= "\"$row[0]\",";
	}
	// drop the last comma
	echo substr($annotationNames, 0, -1) . "]";